ERS3716765
SRA accession
ANDV_sample13
description
Chile
geographic location (country and/or sea)
Blood
http://purl.obolibrary.org/obo/UBERON_0000178
material
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
organism
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
scientific name
Male
http://purl.obolibrary.org/obo/PATO_0000384
sex
Andes orthohantavirus (ANDV) is an important human pathogen that cause hantavirus cardiopulmonary syndrome (HCPS) with a fatality rate of 30% in Chile. Clinical course may present as a mild or severe illness. The influence of genetic factors of the host in the different clinical courses is currently poorly understood. Our goal was to identify copy number variats (CNVs) associated with different clinical courses (mild or severe) in patients infected with ANDV. We recruited 195 patients (88 mild and 107 severe). Genotyping was performed using Affymetrix Genome-Wide SNP Array 6.0. We performed CNVs Genome Wide Association (GWAs) analisys.
submission description
GSB-1852
submission identifier
Host genetic factors and severity of Andes orthohantavirus infection: a genome wide association study
submission title