SAMD00069322
External Id
Research and Education Center for Prevention of Global Infectious Diseases of Animals, Agriculture, Tokyo University of Agriculture and Technology
INSDC center name
2017-02-09T00:00:00Z
INSDC first public
2023-10-29T03:54:08.350Z
INSDC last update
DRS040604
INSDC secondary accession
live
INSDC status
MIGS.vi
NCBI submission model
MIGS.vi.6.0
NCBI submission package
DRS040604
SRA accession
1990
collection date
These viruses were isolated from a fecal sample collected from one cow at the same time in 1990 in the Ishikawa prefecture. To identify sequences of this virus, deep sequencing using Miseq was conducted. As a results of assembly using raw reads, contigs related to two species of virus (Enterovirus E and F) were obtained. The different virus species were included in fastq file obtained from analysis.
description
cattle
http://purl.obolibrary.org/obo/LBO_0001036
env_broad_scale
feces
http://purl.obolibrary.org/obo/NCIT_C13234
env_local_scale
feces
http://purl.obolibrary.org/obo/NCIT_C13234
env_medium
Japan:Ishikawa
geo loc name
Bos taurus
http://purl.obolibrary.org/obo/NCBITaxon_9913
host
http://link.springer.com/article/10.1007%2Fs00705-012-1424-6
isol_growth_condt
restricted access
lat lon
1
num_replicons
Enterovirus sp.
http://purl.obolibrary.org/obo/NCBITaxon_47681
organism
Identification of a novel bovine enterovirus possessing highly divergent amino acid sequences in capsid protein
project name
EV-E_Ishikawa and EV-F Ishikawa
sample name
IS1/Bos taurus/JPN/1990 and IS2/Bos taurus/JPN/1990
title