SAMD00080950
External Id
Bio-Environmental Engineering Lab, Department of Sustainable Energy and environmental Engineering, Graduate School of Engineering, Osaka university
INSDC center name
2017-06-22T00:00:00Z
INSDC first public
2023-10-22T04:24:49.347Z
INSDC last update
DRS074549
INSDC secondary accession
live
INSDC status
MIGS.ba.plant-associated
NCBI submission model
MIGS.ba.plant-associated.6.0
NCBI submission package
DRS074549
SRA accession
Hidehiro Ishizawa
biomaterial provider
symbiont
biotic relationship
2015-08-27
collection date
0.3
depth
Plant growth-promoting bacteria isolated from duckweed Lemna minor
description
Wetland
env_broad_scale
Pond
env_local_scale
water
http://purl.obolibrary.org/obo/CHEBI_15377
env_medium
450000000
estimated size
1
extrachrom_elements
Japan
geo loc name
liquid
http://purl.obolibrary.org/obo/CHMO_0000524
growth_med
Lemna minor
host
4472
host taxid
RDSC 5512
infra specific name
clone
infra_specific_rank
10.1186/s13068-017-0746-8
isol_growth_condt
34.47 N 135.30 E
lat lon
frond
life stage
DLM
locus_tag_prefix
10% LB medium
mineral_nutr_regm
1
num_replicons
Aquitalea magnusonii
http://purl.obolibrary.org/obo/NCBITaxon_332411
organism
aerobic
http://purl.obolibrary.org/obo/EO_0007024
oxy_stat_samp
root or frond
plant body site
Analysis of whole genome sequence of Aquitalea magnusonii H3
project name
10.1186/s13068-017-0746-8
ref_biomaterial
aerobe
http://purl.obolibrary.org/obo/EO_0007024
rel_to_oxygen
successively cultured in 10% LB medium containing 1.5% agar
samp mat process
10% LB medium with 1.5% agar
samp_collect_device
2 years
http://purl.obolibrary.org/obo/UO_0000036
samp_store_dur
laboratory
samp_store_loc
-80
samp_store_temp
Genome Aquitalea magnusonii strain H3
sample name
H3
strain
Genome sequencing sample of Aquitalea magnusonii strain H3
title
80 fronds
tot_mass
heterotroph
trophic_level