SAMN08018200
External Id
University of Queensland
INSDC center name
2017-11-13T00:00:00Z
INSDC first public
2023-10-31T21:06:56.932Z
INSDC last update
SRS2847893
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
SRS2847893
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
76.63%
completeness_estimated
6.42%
contamination_estimated
true
environmental sample
278.36x
genome coverage
UBA11344
isolate
microbial mat
http://purl.obolibrary.org/obo/ENVO_01000008
isolation source
BWA (BWA-MEM)
mapping_method
0.7.12-r1039
mapping_method_version
microbial mat metagenome
metagenome source
true
metagenomic
microbial mat metagenome
note
Microcoleaceae cyanobacterium UBA11344
http://purl.obolibrary.org/obo/NCBITaxon_2055792
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
metagenomic assembly
sample type
Uncultivated Microcoleaceae bacterium UBA11344 genome recovered from SRX319064
title
This BioSample is a metagenomic assembly obtained from the microbial mat metagenome reads: SRR931294.
value