SAMN23418378
External Id
SARS-CoV-2/Human/USA/OR-CDC-UW21110575198/2021
External Id
CDC-OAMD
INSDC center name
2021-11-24T00:00:00Z
INSDC first public
2023-09-01T18:30:26.780Z
INSDC last update
SRS18771023
INSDC secondary accession
live
INSDC status
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS18771023
SRA accession
UW Virology Lab
collected by
2021-11-05
collection date
ct
diagnostic_gene_name_1
INP
diagnostic_pcr_Ct_value_1
INP
diagnostic_pcr_protocol_1
USA: Oregon
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
54
host age
COVID-19
http://purl.obolibrary.org/obo/MONDO_0100096
host disease
White
http://purl.obolibrary.org/obo/HANCESTRO_0005
host race
male
http://purl.obolibrary.org/obo/PATO_0000384
host sex
SARS-CoV-2/Human/USA/OR-CDC-UW21110575198/2021
isolate
AY.100
http://www.ebi.ac.uk/efo/EFO_0007874
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title