SAMN20062411
External Id
Alexandria University
INSDC center name
2023-10-20T00:00:00Z
INSDC first public
2023-10-20T22:56:03.004Z
INSDC last update
SRS9443449
INSDC secondary accession
live
INSDC status
MIMS.me
NCBI submission model
MIGS/MIMS/MIMARKS.plant-associated
NCBI submission model
MIMS.me.plant-associated.6.0
NCBI submission package
SRS9443449
SRA accession
parasite
biotic_relationship
2020-12-01
collection_date
Alfalfa mosaic virus,Potato leafroll virus,Potato virus Y, Tobacco vein-clearing virus, Red clover bacilliform virus
description
ENVO:00000114
env_broad_scale
not applicable
env_local_scale
not applicable
env_medium
PLRV 5.9 kb, PVY 10kb, AMV 3,643, 2,593, and 2,038 nucleotides for RNA1,2 and 5
estimated_size
Egypt: local agriculture field
geo_loc_name
Solanum tuberosum (potato)
host
60-70 days old
host_age
~40 Cm
host_height
Glatika cultivar
host_infra_specific_name
EsHhFa 6
isolate
Potato plant leaves stored in RNALater
isolation_source
30.61 N 30.43 E
lat_lon
plant metagenome
http://purl.obolibrary.org/obo/NCBITaxon_1297885
organism
Winter
season_environment
viral fraction RNA metagenome (RNA virome)
source_uvig
S6 in RNAlater
title
not applicable
virus_enrich_appr