SAMN22047685
External Id
G10K
INSDC center name
2021-10-04T00:00:00Z
INSDC first public
2023-08-23T16:07:35.687Z
INSDC last update
SRS18702625
INSDC secondary accession
live
INSDC status
Model organism or animal
NCBI submission model
Model.organism.animal.1.0
NCBI submission package
SRS18702625
SRA accession
Smithsonian Conservation Biology Institute
biomaterial provider
June 9 1999
birth date
Fossil Rim Wildlife Center, Glen Rose, Texas, USA
birth location
Budhan Pukazhenthi
collected by
The Southern black rhinoceros is a subspecies of the black rhinoceros, native to southern parts of Africa. As of 2021 it is considered critically endangered. This trio of samples was collected to create a high-quality reference genome for two haplotypes. The female (mDicBic1) called Mupani who the reference genome was generated, was born in the Fossil Rim Wildlife Center in Texas. Her mother Coco (mDicBic2) and father (mDicBic3), originally from Zimbabwe. Sample collection was conducted by Budhan Pukazhenthi, in coordination with Klaus-Peter Koepfli. Blood from these samples were used to create high-quality reference genome assemblies of each haplotype, coordinated by Erich Jarvis and Olivier Fedrigo, at the Rockefeller University Vertebrate Genome Lab, as part of the Vertebrate Genomes Project (VGP). The data from these BioSamples are currently under a G10K-VGP publication embargo until removed from this description, following the G10K data use policy at the following URL: https://genome10k.soe.ucsc.edu/about/data_use_policy.
description
juvenile
dev stage
USA
geo loc name
mBicDic1
isolate
32.1795 N 97.7972 W
lat lon
Mupani
name
Diceros bicornis minor
http://purl.obolibrary.org/obo/NCBITaxon_77932
organism
female
http://purl.obolibrary.org/obo/PATO_0000383
sex
-80C
store_cond
718
stud_book_number
minor
sub species
blood
tissue
Animal sample from Diceros bicornis minor (Southern black rhinoceros) for VGP genome mDicBic1
title
Flash Frozen
treatment