SAMN22550098
External Id
G10K
INSDC center name
2021-10-24T00:00:00Z
INSDC first public
2023-08-23T20:00:20.130Z
INSDC last update
SRS18706220
INSDC secondary accession
live
INSDC status
Model organism or animal
NCBI submission model
Model.organism.animal.1.0
NCBI submission package
SRS18706220
SRA accession
4 months
http://purl.obolibrary.org/obo/UO_0000035
age
ARMI Monash University
biomaterial provider
September 2018
birth date
ARMI Monash University
birth location
Frank Tulenko
collected by
2019-01-02
collection date
02-Jan-2019
death_date
The epaulette shark (Hemiscyllium ocellatum) species of longtailed carpet shark, found in shallow, tropical waters off of Australia and New Guinea. The common name comes from the large, white-margined black spot behind each pectoral fin, reminiscent of military epaulettes. they are nocturnal and walk with their fins (from Wikipedia entries). This juvenile male is from trio of samples (parents) breed and collected to create a high-quality reference genome for both maternal and paternal haplotypes. The juvenile was bred in captivity. Breeding and sample collection was conducted by Frank Tulenko, in coordination with Gavin Naylor, Peter Currie, and Olivier Fedrigo. Spleen from the male was used to create high-quality reference genome assemblies of each haplotype. Genome sequencing and assembly was coordinated by Erich D. Jarvis, and Olivier Fedrigo at the Rockefeller University Vertebrate Genome Lab, and Shawn Burgess, Jim Mullikin, and Adam Phillippy at NIH, as part of the Vertebrate Genomes Project (VGP).
description
juvenile
dev stage
Australia: Clayton, Melbourne, Victoria
geo loc name
sHemOce1
isolate
37.9105 S 145.1293 E
lat lon
Hemiscyllium ocellatum
http://purl.obolibrary.org/obo/NCBITaxon_170820
organism
male
http://purl.obolibrary.org/obo/PATO_0000384
sex
Juvenile #1654
specimen voucher
-80oC
store_cond
spleen
http://purl.obolibrary.org/obo/BTO_0001281
tissue
Animal sample from Hemiscyllium ocellatum (epaulette shark) for VGP genome, sHemOce1
title
flash frozen
treatment