SAMN32348883
External Id
G10K
INSDC center name
2022-12-21T00:00:00Z
INSDC first public
2023-08-23T11:39:19.560Z
INSDC last update
SRS18698971
INSDC secondary accession
live
INSDC status
Model organism or animal
NCBI submission model
Model.organism.animal.1.0
NCBI submission package
SRS18698971
SRA accession
Axel Meyer, University of Konstanz
biomaterial_provider
Joost Woltering
collected_by
The striped catfish (Pangasianodon hypophthalmus) is a species of shark catfish (family Pangasiidae) native to the rivers of Southeast Asia. It has some morphological features that make it look like a shark. It is heavily cultivated as a food source, and endangered of extinction in the wild. This sample is from an animal collected by Joost Woltering and Axel Meyer from a fish market in Frankfurt, Germany, and likely from a breeding agriculture source. The sample was used to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing was conducted at the the Max Planck Dresden Genome Center in Germany, conducted and coordinated by Gene Myers, Sylke Winkler, and Thomas Brown.
description
juvenile
dev_stage
Germany: Frankfurt
geo_loc_name
fPanHyp1
isolate
50.1109 N 8.6821 E
lat_lon
Pangasianodon hypophthalmus
http://purl.obolibrary.org/obo/NCBITaxon_310915
organism
not collected
sex
-80oC
store_cond
liver, muscle
tissue
Animal sample from Pangasianodon hypophthalmus (striped catfish) for VGP reference genome, fPanHyp1
title
frozen in 100% ETOH
treatment