AtSPHERE website (https://www.at-sphere.com); Bai et al., (2015)
DataBase
SAMN32137919
External Id
Okinawa Instittue of Science and Technology Graduate University
INSDC center name
2023-11-01T00:50:40.687Z
INSDC first public
2023-11-01T00:50:40.687Z
INSDC last update
live
INSDC status
Metagenome or environmental
NCBI submission model
Metagenome.environmental.1.0
NCBI submission package
ERS16752402
SRA accession
Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research
biomaterial_provider
Alicia Jimenez Fernandez
collected_by
2020
collection_date
16SrRNA reads of 6 bacteria in mixed culture sampled at Day 2 and 5 with Illumina MiSeq.
description
Germany: Cologne
geo_loc_name
Arabidopsis thaliana
host
Rhizobium (Root 142); Achromobacter (Root 83, Root 170); Acinetobacter (Root 1280); Streptomyces (Root 55); Bacillus (Root 239, Root 920)
isolate
Soil around the root
isolation_source
missing
lat_lon
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
organism
Forward reads of mixed organisms at Day 2 and 5
sample_type
R.solanacearum GMI1600; R.solanacearum SL341
strain
Metagenome or environmental sample from soil metagenome
title