SAMN29717033
External Id
GenomeTrakr Project: Washington State Department of Health
INSDC center name
2022-07-13T00:00:00Z
INSDC first public
2023-08-23T13:21:53.331Z
INSDC last update
SRS13843289
INSDC secondary accession
live
INSDC status
SARS-CoV-2: wastewater surveillance
NCBI submission model
SARS-CoV-2.wwsurv.1.0
NCBI submission package
SRS13843289
SRA accession
Washington State Department of Health
collected_by
2022-06-24
collection_date
WA0093317
collection_site_id
ceres nanotrap
concentration_method
OC43 Recovery Control
extraction_control
MagMAX Viral/Pathogen Nucleic Acid Isolation Kit
extraction_method
USA: Washington
geo_loc_name
See ww_flow
instantaneous_flow
wastewater
isolation_source
wastewater metagenome
http://purl.obolibrary.org/obo/NCBITaxon_527639
organism
GenomeTrakr; LFFM ww project
project_name
public health surveillance community-level
purpose_of_ww_sampling
Community Surveillance
purpose_of_ww_sequencing
Washington State Department of Health
sequenced_by
SARS-CoV-2: wastewater surveillance
title
7.1
ww_flow
120000
ww_population
No
ww_pre_treatment
24
ww_sample_duration
raw wastewater
ww_sample_matrix
wastewater treatment plant
ww_sample_site
composite
ww_sample_type
SARS-CoV-2
ww_surv_target_1
16586641
ww_surv_target_1_conc
Copies/L
ww_surv_target_1_conc_unit
N gene (N1)
ww_surv_target_1_gene
yes
ww_surv_target_1_known_present
ddPCR (droplet digital PCR)
ww_surv_target_1_protocol
SARS-CoV-2
ww_surv_target_2
18503444
ww_surv_target_2_conc
Copies/Liter
ww_surv_target_2_conc_unit
N gene (N2)
ww_surv_target_2_gene
yes
ww_surv_target_2_known_present
4.6
ww_temperature