SAMN38124867
External Id
Chattogram Veterinary and Animal Sciences University
INSDC center name
2023-11-07T00:00:00Z
INSDC first public
2023-11-07T05:37:22.887Z
INSDC last update
SRS19434659
INSDC secondary accession
live
INSDC status
Metagenome or environmental
NCBI submission model
Metagenome.environmental.1.0
NCBI submission package
SRS19434659
SRA accession
Holstein Friesian, Sahiwal
breed
2021-12-20
collection_date
We endeavored to use modern metagenomic approaches to investigate the bacterial community structures associated with diarrhea in young calves older than six months. After 16S rRNA amplicon sequencing, diversity analyses were carried out to compare the microbial composition of feces from diarrheal calves to that of healthy calves. Here, we observed significantly less bacterial richness in the non-diarrheic calve's feces than in the diarrheic calve's feces. Comparing the gut microbiomes of calves with and without diarrhea, we revealed significant differences in microbial community composition.
description
Bangladesh
geo_loc_name
Calf
host
DF1
isolate
Calf feces
isolation_source
22.3752 N 91.8349 E
lat_lon
bovine gut metagenome
http://purl.obolibrary.org/obo/NCBITaxon_506599
organism
Not applicable
ref_biomaterial
not applicable
rel_to_oxygen
Falcon tube
samp_collect_device
Not collected
samp_mat_process
50ml
samp_size
Not collected
source_material_id
Metagenome sample from Bovine gut metagenome
title