pmrB_E123D,ptsI_V25I,gyrA_D87N,gyrA_S83L,glpT_E448K,uhpT_E350Q,parC_E84V,parC_S80I,parE_I529L,blaNDM-5,ble,sul1,aadA2,dfrA12,tet(A),mph(A),blaCTX-M-15,aac(3)-IIe,catB3,blaOXA-1,aac(6')-Ib-cr5
AMRFinderPlus AMR core genes
AMIKACIN/KANAMYCIN/QUINOLONE/TOBRAMYCIN,BETA-LACTAM,BLEOMYCIN,CARBAPENEM,CEPHALOSPORIN,CHLORAMPHENICOL,COLISTIN,EFFLUX,FOSFOMYCIN,GENTAMICIN,MACROLIDE,QUINOLONE,STREPTOMYCIN,SULFONAMIDE,TETRACYCLINE,TRIMETHOPRIM
AMRFinderPlus AMR subclasses
2023-04-17.1
AMRFinderPlus DB version
SAMN38146128
External Id
Los Angeles County Public Health Lab microbial pathogen submission group
INSDC center name
2023-11-07T00:00:00Z
INSDC first public
2023-11-07T15:59:26.163Z
INSDC last update
SRS19438222
INSDC secondary accession
live
INSDC status
ST131
MLST
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
ecoli_achtman_4
PubMLST scheme
SRS19438222
SRA accession
2023-09-12
collection date
USA: California, Los Angeles County
geographic location
Homo sapiens
host
LACPHL-BACT-2023-00154
isolate
urine
isolation source
Escherichia coli
http://purl.obolibrary.org/obo/NCBITaxon_562
organism
whole organism
sample type
Microbe sample from Escherichia coli
title