SAMN36985128
External Id
Los Angeles County Public Health Lab microbial pathogen submission group
INSDC center name
2023-08-14T00:00:00Z
INSDC first public
2023-09-26T08:41:03.418Z
INSDC last update
SRS18617562
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS18617562
SRA accession
glpT_E448K,gyrA_D87N,gyrA_S83L,pmrB_E123D,parC_E84V,parC_S80I,parE_I529L,ptsI_V25I,uhpT_E350Q,blaTEM-1,blaOXA-48
amrfinderplus_amr_genes
BETA-LACTAM,CARBAPENEM,COLISTIN,EFFLUX,FOSFOMYCIN,QUINOLONE
amrfinderplus_amr_subclasses
2023-04-17.1
amrfinderplus_db_version
2023-05-15
collection_date
USA: California, Los Angeles County
geo_loc_name
Homo sapiens
host
blood
isolation_source
ST11672
mlst
Escherichia coli
http://purl.obolibrary.org/obo/NCBITaxon_562
organism
ecoli_achtman_4
pubmlst_scheme
whole organism
sample_type
LACPHL-BACT-2023-00047
strain
Microbe sample from Escherichia coli
title