SAMN36985107
External Id
Los Angeles County Public Health Lab microbial pathogen submission group
INSDC center name
2023-08-14T00:00:00Z
INSDC first public
2023-09-26T08:41:03.107Z
INSDC last update
SRS18617539
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS18617539
SRA accession
ftsI_N337NYRIN,parC_S80I,parE_S458A,gyrA_D87N,gyrA_S83L,blaNDM-5,ble,sul1,aadA2,dfrA12,blaTEM-1,rmtB1,mph(A),erm(B)
amrfinderplus_amr_genes
AMINOGLYCOSIDE,AZTREONAM,BETA-LACTAM,BLEOMYCIN,CARBAPENEM,EFFLUX,MACROLIDE,QUINOLONE,STREPTOMYCIN,SULFONAMIDE,TRIMETHOPRIM
amrfinderplus_amr_subclasses
2023-04-17.1
amrfinderplus_db_version
2023-06-30
collection_date
USA: California, Los Angeles County
geo_loc_name
Homo sapiens
host
urine
isolation_source
ST167
mlst
Escherichia coli
http://purl.obolibrary.org/obo/NCBITaxon_562
organism
ecoli_achtman_4
pubmlst_scheme
whole organism
sample_type
LACPHL-BACT-2023-00026
strain
Microbe sample from Escherichia coli
title