WK128-4786_BioSample
External Id
SAMN36990527
External Id
UNC Charlotte Environmental Monitoring Laboratory
INSDC center name
2023-08-15T00:00:00Z
INSDC first public
2023-08-15T11:26:41.580Z
INSDC last update
SRS18611934
INSDC secondary accession
live
INSDC status
SARS-CoV-2: wastewater surveillance
NCBI submission model
SARS-CoV-2.wwsurv.1.0
NCBI submission package
SRS18611934
SRA accession
North Carolina Department of Health and Human Services
collected_by
2023-06-27
collection_date
WK128-4786
collection_site_id
08:00
collection_time
40
collection_volume
membrane filtration with acidification and mgcl2
concentration_method
bcov vaccine
extraction_control
nuclisens manual magnetic bead extraction kit
extraction_method
USA: North Carolina
geo_loc_name
wastewater
isolation_source
wastewater metagenome
http://purl.obolibrary.org/obo/NCBITaxon_527639
organism
wastewater metagenome
organism
Wastewater sequencing of NC Wastewater Monitoring Network samples
project_name
public health surveillance community-level
purpose_of_ww_sampling
public health surveillance for the NC Wastewater Monitoring Network
purpose_of_ww_sequencing
WK128-4786
sample_name
raleigh
sample_title
University of North Carolina at Charlotte
sequenced_by
07-12-23-A4-1 BioSample
title
pepper mild mottle virus
ww_endog_control_1
racki et al. 2014; haramoto et al 201
ww_endog_control_1_protocol
45.1
ww_flow
4.0
ww_industrial_effluent_percent
550000
ww_population
census blocks clipped to wastewater service area polygon
ww_population_source
no
ww_pre_treatment
24
ww_sample_duration
raw wastewater
ww_sample_matrix
wastewater treatment plant
ww_sample_site
composite
ww_sample_type
NC
ww_surv_jurisdiction
NCWW13199
ww_surv_system_sample_id
SARS-CoV-2
ww_surv_target_1
2201.239578
ww_surv_target_1_conc
copies/L
ww_surv_target_1_conc_unit
N gene (N1)
ww_surv_target_1_gene
yes
ww_surv_target_1_known_present
decaro et al. detection of bovine coronavirus using a taqman-based real-time rt-pcr assay.
ww_surv_target_1_protocol
SARS-CoV-2
ww_surv_target_2
12309.18169
ww_surv_target_2_conc
copies/L
ww_surv_target_2_conc_unit
N gene (N2)
ww_surv_target_2_gene
yes
ww_surv_target_2_known_present
4
ww_temperature