SAMN36985147
External Id
Los Angeles County Public Health Lab microbial pathogen submission group
INSDC center name
2023-08-14T00:00:00Z
INSDC first public
2023-09-26T08:41:03.725Z
INSDC last update
SRS18617583
INSDC secondary accession
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
SRS18617583
SRA accession
gyrA_D87N,gyrA_S83L,glpT_E448K,ftsI_N337NYRIN,parC_S80I,parE_S458A,tet(A),blaCMY-145,blaCTX-M-15,blaNDM-5,ble,sul1,aadA2,dfrA12,mph(A)
amrfinderplus_amr_genes
AZTREONAM,BETA-LACTAM,BLEOMYCIN,CARBAPENEM,CEPHALOSPORIN,EFFLUX,FOSFOMYCIN,MACROLIDE,QUINOLONE,STREPTOMYCIN,SULFONAMIDE,TETRACYCLINE,TRIMETHOPRIM
amrfinderplus_amr_subclasses
2023-04-17.1
amrfinderplus_db_version
2023-05-23
collection_date
USA: California, Los Angeles County
geo_loc_name
Homo sapiens
host
urine
isolation_source
ST361
mlst
Escherichia coli
http://purl.obolibrary.org/obo/NCBITaxon_562
organism
ecoli_achtman_4
pubmlst_scheme
whole organism
sample_type
LACPHL-BACT-2023-00066
strain
Microbe sample from Escherichia coli
title