SAMN37071646
External Id
King Abdullah University of Science and Technology (KAUST)
INSDC center name
2023-08-21T00:00:00Z
INSDC first public
2023-09-05T07:11:20.873Z
INSDC last update
SRS18797492
INSDC secondary accession
live
INSDC status
Plant
NCBI submission model
Plant.1.0
NCBI submission package
SRS18797492
SRA accession
NA
age
2020-11-27
collection_date
NA
cultivar
This study utilizes a whole-genome sequencing (WGS) panel of wild emmer wheat (WEW), consisting of single seed descents of 291 naturally collected accessions that are conserved in the Wheat Genetics Resource Center (WGRC) gene bank at Kansas State University (KSU). The geographical origins of these accessions encompass the Middle Eastern territories, primarily Israel, Turkey, Syria, Lebanon, Iraq, and Iran. Our investigation delves into the population composition of WEW through phylogenetic clustering, principal component analysis (PCA), and population structure analysis. Additionally, we subjected this panel to screenings for disease resistance against various strains of leaf, stem, and stripe rusts. In this archive, we have deposited the raw sequencing data of these accessions. The association of these important traits with particular genomic loci provides us with candidate genes to improve cultivated wheat.
description
Seedling
dev_stage
NA
ecotype
USA: Kansas
geo_loc_name
NA
isolate
Triticum dicoccoides
http://purl.obolibrary.org/obo/NCBITaxon_85692
organism
leaf
tissue
Plant sample from Triticum turgidum subsp. dicoccoides
title