SAMN37162739
External Id
University of Baghdad
INSDC center name
2023-08-28T00:00:00Z
INSDC first public
2023-10-03T10:13:57.249Z
INSDC last update
live
INSDC status
MIGS.ba
NCBI submission model
MIGS/MIMS/MIMARKS.host-associated
NCBI submission model
MIGS.ba.host-associated.6.0
NCBI submission package
2022-12
collection_date
Enterococcus faecium were isolated from honey bee gut collected from almadayin Diyala Iraq using MRS agar under anaerobic condition to grow lactic acid bacteria then the single colony was inoculated in MRS broth to get bacterial crude so measure the inhibition zone against four types of MDR bacteria. The best isolate that give higher inhibition zone diagnose using 16srRNA which improve that it is a new strain so this strain was sent to do Whole genome sequencing using NGS by Marogen company and using De novo analysis to analyze the raw data.
description
missing
env_broad_scale
missing
env_local_scale
honey bee
env_medium
Iraq:Almadayin Diyala
geo_loc_name
Apis mellifera
host
anaerobic condition
isol_growth_condt
honey bee gut; MRS agar
isolation_source
not provided
lat_lon
distilled water
neg_cont_type
151
num_replicons
Enterococcus faecium
http://purl.obolibrary.org/obo/NCBITaxon_1352
organism
not provided
pos_cont_type
none
ref_biomaterial
SMAN_Baghdad
strain
MIGS Cultured Bacterial/Archaeal sample from Enterococcus faecium
title