SAMN38264339
External Id
University of Virginia's College at Wise
INSDC center name
2023-11-18T00:00:00Z
INSDC first public
2023-11-18T12:19:57.569Z
INSDC last update
live
INSDC status
Metagenome or environmental
NCBI submission model
Metagenome.environmental.1.0
NCBI submission package
2023-05
collection_date
USA: Virginia, Smyth County
geo_loc_name
not applicable
host
20 Liters of water were removed from a pond at the Commonwealth of Virginias Aquatic Wildlife Conservation Center and incubated in a 10 gallon fish tank for 96 hours. 1 Liter of water was passed through a 0.45 micron filter. DNA was extracted from the microbes caught on the filter using Qiagens Power Water kit. ITS fungi barcodes were PCR amplified. Illumina sequencing, including library preparation, was completed by Azenta (South Plainfield, NJ, USA).
isolation_source
36.45 N 81.32 W
lat_lon
freshwater metagenome
http://purl.obolibrary.org/obo/NCBITaxon_449393
organism
77
source_material_id
Fungal ITS Metabarcoding Analysis of water from AWCC pond incubated in a fish tank for 96 hours replicate 2
title