SAMN38220016
External Id
Oregon State University
INSDC center name
2023-11-20T00:50:21.633Z
INSDC first public
2023-11-20T00:50:21.633Z
INSDC last update
SRS19508943
INSDC secondary accession
live
INSDC status
SARS-CoV-2: wastewater surveillance
NCBI submission model
SARS-CoV-2.wwsurv.1.0
NCBI submission package
SRS19508943
SRA accession
Oregon State University/Oregon Health Authority
collected_by
2022-11-29
collection_date
USA: Oregon
geo_loc_name
wastewater
isolation_source
wastewater metagenome
http://purl.obolibrary.org/obo/NCBITaxon_527639
organism
public health surveillance community-level
purpose_of_ww_sampling
public health surveillance community-level
purpose_of_ww_sequencing
Oregon State University
sequenced_by
SARS-CoV-2: wastewater surveillance sample from wastewater metagenome
title
25248618
ww_flow
92850
ww_population
24
ww_sample_duration
raw wastewater
ww_sample_matrix
wastewater treatment plant
ww_sample_site
composite
ww_sample_type
SARS-CoV-2
ww_surv_target_1
4.901
ww_surv_target_1_conc
copies/L
ww_surv_target_1_conc_unit
N gene (orf9)
ww_surv_target_1_gene
yes
ww_surv_target_1_known_present
Not Provided: ddPCR detection of SARS-CoV-2 using the BioRad nCoV assay on the BioRad QXTwo
ww_surv_target_1_protocol