SAMN02299441
External Id
University of Maryland School of Medicine, Institute for Genome Sciences
INSDC center name
2013-08-02T00:00:00Z
INSDC first public
2023-12-24T02:02:39.715Z
INSDC last update
live
INSDC status
MIGS.ba
NCBI submission model
MIGS.ba.6.0
NCBI submission package
ERS17604680
SRA accession
Newbler v2.3-04192010
assembly
terrestrial biome [ENVO:00000446]
biome
not determined
collection date
DSM:10105
culture-collection
Keywords: GSC:MIxS;MIGS:6.0
description
1891000
estimated size
human-associated habitat [ENVO:00009003]
feature
Level 5: Non-contiguous Finished99.8x;2
finishing strategy (depth of coverage)
not determined
geo loc name
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
host
9606
host taxid
bacteria_archaea
investigation type
not determined
isol_growth_condt
oral cavity
http://purl.obolibrary.org/obo/UBERON_0000167
isolation-source
not determined
lat lon
biological product [ENVO:02000043]
material
not determined
misc_param: HMP body site
oral
misc_param: HMP supersite
not determined
nucleic acid extraction
not determined
num_replicons
Parascardovia denticolens DSM 10105 = JCM 12538
http://purl.obolibrary.org/obo/NCBITaxon_864564
organism
Parascardovia denticolens DSM 10105
project name
Reference Genome
project_type
not determined
ref_biomaterial
454-Paired-end
sequencing method
http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sop
DSM 10105
source_mat_id
DSM 10105
strain
MIGS Cultured Bacterial/Archaeal sample from Parascardovia denticolens DSM 10105
title
type strain of Bifidobacterium denticolens
type-material