Level 5: Non-contiguous Finished
Current Finishing Status
SAMN02849400
External Id
DOE-CSP 2010
Funding Program
Gi04512
GOLD Stamp ID
Prodigal 1.4, GenePRIMP
Gene Calling Method
Gram-
Gram Staining
DOE Joint Genome Institute
INSDC center name
2014-06-10T00:00:00Z
INSDC first public
2023-12-05T21:07:50.779Z
INSDC last update
SRS1566637
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
SRS1566637
SRA accession
Nonsporulating
Sporulation
Yes
Type Strain
ALLPATHS v. R37654
assembly
free living
biotic relationship
Rod-shaped
cell shape
JFBS
common name
Japan
country
DSM:17970
culture-collection
Rice paddies; Soil; Host
environment
bacteria_archaea
investigation type
16957124
isol_growth_condt
rice-plant residue in flooded anoxic rice-field soil in Yamagata, Japan
isolation site
38.25222 N 140.335602 E
lat lon
Nonmotile
motility
Xylanibacter oryzae DSM 17970
http://purl.obolibrary.org/obo/NCBITaxon_915438
organism
5.7 - 6.2
ph
Xylanibacter oryzae KB 3, DSM 17970
project name
DSM 17970, JCM 13648
ref_biomaterial
obligate anaerobe
rel_to_oxygen
WGS
http://www.ebi.ac.uk/efo/EFO_0010172
sequencing_meth
DSM 17970
strain
30
temperature optimum
Mesophile
temperature range
Sample from Xylanibacter oryzae DSM 17970
title
type strain of Xylanibacter oryzae
type-material