SAMN02743903
External Id
DOE-CSP 2012
Funding Program
Gi11102
GOLD Stamp ID
Prodigal 2.5
Gene Calling Method
Gram-
Gram Staining
DOE Joint Genome Institute
INSDC center name
2014-05-05T00:00:00Z
INSDC first public
2023-12-24T02:06:49.182Z
INSDC last update
SRS1368299
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
SRS1368299
SRA accession
Yes
Type Strain
vpAllpaths v. r46652
assembly
Rod-shaped
cell shape
1996
collection date
JHZK
common name
DSM:17143
culture-collection
Aquatic; Brackish water; Mat
environment
Level 1: Standard Draft
finishing strategy
bacteria_archaea
investigation type
18774253
isol_growth_condt
Benthic microbial mat in a brackish pond (R2) located on the rim of the Rangiroa atoll
isolation site
15.082732 S 147.490826 W
lat lon
Motile
motility
Afifella pfennigii DSM 17143
http://purl.obolibrary.org/obo/NCBITaxon_1120956
organism
6.3-8.5
ph
Afifella pfennigii DSM 17143
project name
DSM 17143
ref_biomaterial
facultative
rel_to_oxygen
Halotolerant
salinity
WGS
http://www.ebi.ac.uk/efo/EFO_0010172
sequencing_meth
DSM 17143
strain
30-35 C
http://www.ebi.ac.uk/efo/EFO_0002120
temperature optimum
Mesophile
temperature range
Sample from Afifella pfennigii DSM 17143
title
phototroph
trophic_level
type strain of Rhodobium pfennigii
type-material