SAMN13743075
External Id
Laboratory of Genetic Breeding
INSDC center name
2023-12-12T00:50:15.423Z
INSDC first public
2023-12-12T00:50:15.423Z
INSDC last update
live
INSDC status
Plant
NCBI submission model
Plant.1.0
NCBI submission package
ERS17755042
SRA accession
3 weeks
age
cultivated peanut
cultivar
We report genome characterization of 160 peanut accessions discovering genetic variations using whole genome resequencing. The present study emphasizes the genetic diversity and genetic structure, extending our previous study. Analyses of these SNPs show that the analyzed peanut accessions can be approximately grouped into two big groups that, to some extent, agree with the botanical classification of peanut at the subspecies level. By taking this genetic structure as well as the relationships between the analyzed accessions into consideration, our GWAS analyses have identified the peak SNPs that are significantly associated with the studied traits, which will be resolved with genetic improvement of peanut.
description
sprout
dev_stage
not collected
ecotype
China
geo_loc_name
Arachis hypogaea
http://purl.obolibrary.org/obo/NCBITaxon_3818
organism
fresh leaf
tissue
Plant sample from Arachis hypogea L.
title