SAMN13193077
External Id
The University of Queensland
INSDC center name
2020-03-02T00:00:00Z
INSDC first public
2023-11-29T21:07:33.527Z
INSDC last update
SRS5771325
INSDC secondary accession
live
INSDC status
MIMAG
NCBI submission model
MIMAG.6.0
NCBI submission package
SRS5771325
SRA accession
CLC de novo assembler
assembly method
4.4.1
assembly_method_version
2011-07-21
collection date
0.7456
completeness_estimated
0.0396
contamination_estimated
This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR636597
derived-from
Uncultivated genome recovered from an assembly of the SRX211001 metagenome.
description
tailings pond
env_broad_scale
not available
http://www.ebi.ac.uk/efo/EFO_0001071
env_local_scale
not available
http://www.ebi.ac.uk/efo/EFO_0001071
env_medium
True
environmental sample
Canada: Syncrude tailings pond, Wood Buffalo, Alberta
geo loc name
UBA9950
isolate
hydrocarbon
isolation source
57.02 N 111.55 W
lat lon
0.7.12-r1039
mapping_method
BWA (BWA-MEM)
mapping_method_version
hydrocarbon metagenome
metagenome source
True
metagenomic
Methanofastidiosum sp.
http://purl.obolibrary.org/obo/NCBITaxon_2666341
organism
CheckM
quality_assessment_method
1.0.6
quality_assessment_method_version
U_71162
title