CFSANSMP000113764
External Id
SAMN26680546
External Id
CFSAN
INSDC center name
2022-03-15T00:00:00Z
INSDC first public
2023-12-06T12:04:14.781Z
INSDC last update
SRS12263479
INSDC secondary accession
live
INSDC status
SARS-CoV-2: wastewater surveillance
NCBI submission model
SARS-CoV-2.wwsurv.1.0
NCBI submission package
PRJNA757447
ProjectAccession
CFSANSMP000113764
PublicAccession
SRS12263479
SRA accession
SARS-CoV-2: wastewater surveillance
attribute_package
FDA Center for Food Safety and Applied Nutrition
collected by
2022-02-22
collection date
MOB
collection_site_id
peg precipitation + ultracentrifugation
concentration_method
Zymo Environ Water RNA kit
extraction_method
wastewater
genus
USA: Alabama
geo loc name
wastewater
isolation source
wastewater metagenome
http://purl.obolibrary.org/obo/NCBITaxon_527639
organism
GenomeTrakr
project name
public health surveillance community-level
purpose_of_ww_sampling
no quality control issues identified
quality_control_details
no quality control issues identified
quality_control_determination
no quality control issues identified
quality_control_issues
CFSAN Wastewater Analysis Pipeline (C-WAP)
quality_control_method
220222MI-46_rep2
sample name
metagenome
species
SARS-CoV-2: wastewater surveillance sample from wastewater metagenome
title
not collected
ww_flow
1
ww_population
0
ww_sample_duration
raw wastewater
ww_sample_matrix
grab
ww_sample_type
CFSANSMP000113764
ww_surv_system_sample_id
SARS-CoV-2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
ww_surv_target_1
16
ww_surv_target_1_conc
no
ww_surv_target_1_known_present
94
ww_surv_target_2_conc