Ceres Nanotrap
Concentration Method (group)
SAMN25978140
External Id
Kentucky State Cabinet for Health and Family Services
INSDC center name
2022-02-15T00:00:00Z
INSDC first public
2023-12-06T12:06:47.059Z
INSDC last update
live
INSDC status
SARS-CoV-2: wastewater surveillance
NCBI submission model
SARS-CoV-2.wwsurv.1.0
NCBI submission package
ERS17299678
SRA accession
180
Ww Population
collection site records
Ww Population Source
Kentucky State Cabinet for Health and Family Services
collected_by
2021-10-06
collection date
WFD
collection_site_id
2L
http://www.ebi.ac.uk/efo/EFO_0002225
collection_volume
ceres nanotrap
concentration_method
ceres magnetic beads
extraction method
USA: Kentucky
geo loc name
wastewater
isolation source
wastewater metagenome
http://purl.obolibrary.org/obo/NCBITaxon_527639
organism
public health surveillance community-level
purpose_of_ww_sampling
Covid concetration
purpose_of_ww_sequencing
Kentucky State Cabinet for Health and Family Services
sequenced_by
M22-095 KF
title
Crassphage
ww_endog_control_1
1121335, 974599
ww_endog_control_1_conc
Bio Rad ddPCR custom
ww_endog_control_1_protocol
Copies/L
ww_endog_control_1_units
180
ww_population
24 hours
ww_sample_duration
raw wastewater
ww_sample_matrix
['', '']
ww_sample_salinity
sewer pipeline
ww_sample_site
composite
ww_sample_type
SARS-CoV-3
ww_surv_target_1
2030, 2088
ww_surv_target_1_conc
Copies/L
ww_surv_target_1_conc_unit
0.062, 0.064,
ww_surv_target_1_extract
Copies/uL
ww_surv_target_1_extract_unit
N1
ww_surv_target_1_gene
yes
ww_surv_target_1_known_present
Bio Rad ddPCR custom
ww_surv_target_1_protocol
SARS-CoV-2
ww_surv_target_2
4060, 2088
ww_surv_target_2_conc
Copies/L
ww_surv_target_2_conc_unit
0.12, 0.06
ww_surv_target_2_extract
Copies/uL
ww_surv_target_2_extract_unit
N2
ww_surv_target_2_gene
yes
ww_surv_target_2_known_present
Bio Rad ddPCR custom
ww_surv_target_2_protocol
['', '']
ww_total_suspended_solids