SAMN27386962
External Id
New Jersey Department of Agriculture
INSDC center name
2022-04-06T00:00:00Z
INSDC first public
2023-12-06T11:59:55.620Z
INSDC last update
SRS15571240
INSDC secondary accession
live
INSDC status
SARS-CoV-2: wastewater surveillance
NCBI submission model
SARS-CoV-2.wwsurv.1.0
NCBI submission package
SRS15571240
SRA accession
New Jersey State Department of Agriculture
collected by
2022-03-04
collection date
NJDA_CWW_site_001
collection_site_id
900 mL
collection_volume
promega wastewater large volume tna capture kit
concentration_method
promega manual tna kit
extraction method
USA: New Jersey
geo loc name
wastewater
isolation source
wastewater metagenome
http://purl.obolibrary.org/obo/NCBITaxon_527639
organism
GenomeTrakr; LFFM ww project
project name
public health surveillance community-level
purpose_of_ww_sampling
detection of target organism by RT PCR or ddPCR
purpose_of_ww_sequencing
New Jersey State Department of Agriculture
sequenced_by
SARS-CoV-2: wastewater surveillance sample from Wastewater metagenome
title
PMMoV
ww_endog_control_1
50000
ww_population
wastewater treatment plant records
ww_population_source
24
ww_sample_duration
raw wastewater
ww_sample_matrix
wastewater treatment plant
ww_sample_site
composite
ww_sample_type
SARS-CoV-2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
ww_surv_target_1
32.06
ww_surv_target_1_conc
cycles (Ct value)
ww_surv_target_1_conc_unit
N gene (N1)
ww_surv_target_1_gene
yes
ww_surv_target_1_known_present
Promega GoTaq Enviro Wastewater SARS-CoV-2 Systems (catalog#: AM2100)
ww_surv_target_1_protocol