SAMN31897015
External Id
New Jersey Department of Agriculture
INSDC center name
2022-11-28T00:00:00Z
INSDC first public
2023-12-06T11:59:57.423Z
INSDC last update
SRS15887370
INSDC secondary accession
live
INSDC status
SARS-CoV-2: wastewater surveillance
NCBI submission model
SARS-CoV-2.wwsurv.1.0
NCBI submission package
SRS15887370
SRA accession
New Jersey State Department of Agriculture
collected_by
2022-01-20
collection_date
NJDA_CWW_site_001
collection_site_id
900 mL
collection_volume
ceres nanotrap
concentration_method
promega ht tna kit
extraction_method
USA: New Jersey
geo_loc_name
wastewater
isolation_source
wastewater metagenome
http://purl.obolibrary.org/obo/NCBITaxon_527639
organism
GenomeTrakr; LFFM ww project
project_name
public health surveillance community-level
purpose_of_ww_sampling
detection of target organism by RT PCR or ddPCR
purpose_of_ww_sequencing
New Jersey State Department of Agriculture
sequenced_by
technical replicate
specimen_processing
raw wastewater had been frozen (-20C) prior to using these conc/ext methods
specimen_processing_details
NJDA_CWW_007_CN
specimen_processing_id
SARS-CoV-2: wastewater surveillance sample from Wastewater metagenome
title
PMMoV
ww_endog_control_1
50000
ww_population
wastewater treatment plant records
ww_population_source
Ceres Nano: Manual Nanotrap Wastewater Protocol using Promega Maxwell HT Environmental TNA Kit (APP-036 Revision 0 Nov 2021)
ww_processing_protocol
24
ww_sample_duration
raw wastewater
ww_sample_matrix
wastewater treatment plant
ww_sample_site
composite
ww_sample_type
SARS-CoV-2
ww_surv_target_1
Not Performed
ww_surv_target_1_conc
Not Performed
ww_surv_target_1_conc_unit
Not Performed
ww_surv_target_1_gene
yes
ww_surv_target_1_known_present
Not Performed
ww_surv_target_1_protocol