SAMN31580159
External Id
Rubber Research Institute of India
INSDC center name
2023-12-30T00:50:46.280Z
INSDC first public
2023-12-30T00:50:46.280Z
INSDC last update
SRS15762369
INSDC secondary accession
live
INSDC status
Plant
NCBI submission model
Plant.1.0
NCBI submission package
SRS15762369
SRA accession
FX516 and RRIM 600
cultivar
Abnormal leaf fall disease caused by Phytophthora spp. is one of the major diseases responsible for significant yield loss in rubber trees (Hevea brasiliensis). Next-generation sequencing based transcriptomic study of two rubber clones: RRIM 600 (susceptible) and FX 516 (tolerant) were performed to understand the molecular basis of host tolerance to fungal diseases. Transcriptomic response of clones showing differential response to Phytophthora infection at early hours, mid hours and late hours of infection were studied. The newly identified differentially regulated genes and sequence variation provide critical knowledge for understanding the genetic basis of disease resistance and for marker development. This aids in developing an efficient crop breeding strategy in a perennial tree crop.
description
juvenile
dev_stage
India
geo_loc_name
Hevea brasiliensis
http://purl.obolibrary.org/obo/NCBITaxon_3981
organism
Leaf
tissue
Transcriptome profiling to comprehend genetic basis of disease resistance against Phytophthora meadii in rubber tree (Hevea brasiliensis)
title