SAMN35446138
External Id
University of Minnesota
INSDC center name
2023-05-27T00:00:00Z
INSDC first public
2023-12-21T16:33:07.080Z
INSDC last update
SRS19960778
INSDC secondary accession
live
INSDC status
MIGS/MIMS/MIMARKS.host-associated
NCBI submission model
MIMARKS.survey
NCBI submission model
MIMARKS.survey.host-associated.6.0
NCBI submission package
SRS19960778
SRA accession
2019-06-01T00:00:00
calving_date
2019-05-30
collection_date
1416546.5
copy_number_16S
-2
days_in_milk
Keywords: GSC:MIxS;MIMARKS:6.0
description
2019-11-24T00:00:00
extraction_date
Farm B
farm_id
USA
geo_loc_name
Bos taurus
host
Teat apex
host_body_habitat
H
host_genotype
Prepartum
host_life_stage
female
host_sex
23147
host_subject_id
9913
host_taxid
34.05
mean_quality
31
megabases
bovine metagenome
http://purl.obolibrary.org/obo/NCBITaxon_1218275
organism
83.38
percent_gt_q30
0.24
percent_of_lane
9.8
percent_one_mismatch
90.2
percent_perfect
100
percent_pf
51716
pf_clusters
Q49
qiacube_batch
Sterile gauze square
samp_collect_device
Sterile gauze square premoistened with 1X phosphate buffer saline
samp_mat_process
-80C
samp_store_temp
Sample
sample_type
2
sequencing_batch
Technician A
technician_id
MIMARKS Survey related sample from bovine metagenome
title