SAMN35445908
External Id
University of Minnesota
INSDC center name
2023-05-27T00:00:00Z
INSDC first public
2023-12-21T16:34:50.187Z
INSDC last update
SRS19960904
INSDC secondary accession
live
INSDC status
MIGS/MIMS/MIMARKS.host-associated
NCBI submission model
MIMARKS.survey
NCBI submission model
MIMARKS.survey.host-associated.6.0
NCBI submission package
SRS19960904
SRA accession
2019-03-23T00:00:00
calving_date
2019-03-01
collection_date
1289825.881
copy_number_16S
-22
days_in_milk
Keywords: GSC:MIxS;MIMARKS:6.0
description
2019-11-12T00:00:00
extraction_date
Farm D
farm_id
USA
geo_loc_name
Bos taurus
host
Teat apex
host_body_habitat
CH
host_genotype
Prepartum
host_life_stage
female
host_sex
8444
host_subject_id
9913
host_taxid
33.74
mean_quality
44
megabases
bovine metagenome
http://purl.obolibrary.org/obo/NCBITaxon_1218275
organism
82.17
percent_gt_q30
0.33
percent_of_lane
10.49
percent_one_mismatch
89.51
percent_perfect
100
percent_pf
72622
pf_clusters
Q30
qiacube_batch
Sterile gauze square
samp_collect_device
Sterile gauze square premoistened with 1X phosphate buffer saline
samp_mat_process
-80C
samp_store_temp
Sample
sample_type
2
sequencing_batch
Technician E
technician_id
MIMARKS Survey related sample from bovine metagenome
title