SAMN35446022
External Id
University of Minnesota
INSDC center name
2023-05-31T00:00:00Z
INSDC first public
2023-12-21T16:33:50.170Z
INSDC last update
SRS19960870
INSDC secondary accession
live
INSDC status
MIGS/MIMS/MIMARKS.host-associated
NCBI submission model
MIMARKS.survey
NCBI submission model
MIMARKS.survey.host-associated.6.0
NCBI submission package
SRS19960870
SRA accession
not applicable
calving_date
not applicable
collection_date
1568.295301
copy_number_16S
not applicable
days_in_milk
Keywords: GSC:MIxS;MIMARKS:6.0
description
not applicable
env_broad_scale
not applicable
env_local_scale
not applicable
env_medium
2019-11-18T00:00:00
extraction_date
Other
farm_id
USA
geo_loc_name
not applicable
host
not applicable
host_body_habitat
not applicable
host_genotype
not applicable
host_life_stage
not applicable
host_sex
not applicable
host_subject_id
not applicable
host_taxid
not applicable
lat_lon
34.31
mean_quality
31
megabases
CD1 lysis buffer (Qiagen, Powersoil Pro Kit)
neg_cont_type
metagenome
http://purl.obolibrary.org/obo/NCBITaxon_256318
organism
84.62
percent_gt_q30
0.24
percent_of_lane
9.54
percent_one_mismatch
90.46
percent_perfect
100
percent_pf
51943
pf_clusters
not applicable
pos_cont_type
Q39
qiacube_batch
not applicable
samp_collect_device
not applicable
samp_mat_process
not applicable
samp_store_temp
Extraction
sample_type
2
sequencing_batch
Technician A
technician_id
MIMARKS Survey related sample from metagenome
title