Endophyte/Epiphyte
Association
Biological Replicate 8
Biological Replicate
SAMN37545978
External Id
Agriculture and Agri-Food Canada
INSDC center name
2023-11-22T00:00:00Z
INSDC first public
2023-11-22T10:33:03.033Z
INSDC last update
live
INSDC status
Microbe, viral or environmental
NCBI submission model
Microbe.1.0
NCBI submission package
Nova Scotia
Province
ERS17860533
SRA accession
2020
collection_date
Illumina Sequencing of Honeycrisp peel fungal communities with ITS2 specific primers. Reference primers ITS86F (5’-GTGAATCATCGAATCTTTGAA-3’) and ITS4(R) (5’- TCCTCCGCTTATTGATATGC-3) were used to amplify the fungal ITS2 region. These primers were selected in order to cover a wide range of fungal diversity, including AMF (Schoch et al., 2012; Berruti et al., 2017; Morgan et al., 2017).
description
Canada: Kentville, Nova Scotia
geo_loc_name
Honeycrisp
host
Not Applicable
isolate
Combined Isolate of 5 fruit from a single tree
isolation_source
Fungi
http://purl.obolibrary.org/obo/NCBITaxon_4751
organism
Unsterilized Peel Tissue
sample_type
Host-Microbiome
strain
Fungicide_Peel_2020_8
title
Conventional Management
treatment