SAMN36733055
External Id
Wayne State University
INSDC center name
2023-07-27T00:00:00Z
INSDC first public
2023-12-11T11:39:29.076Z
INSDC last update
live
INSDC status
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
ERS17850326
SRA accession
GCA_034425135.2
assembly_ID
Andrew D. Berti
collected_by
2016-09-16
collection_date
Other isolates from this patient: BSN51-2, BSN51-3, BSN51-4.
description
ST5-MSSA CC5
genotype
Staphylococcus
genus
USA: Detroit, MI
geo_loc_name
Homo sapiens
host
67
host_age
Patient with COPD, heart failure and end-stage renal disease presents with shortness of breath. Treated with emergent dialysis for fluid overload with incidental finding of staphylococcal bacteremia. Echocardiogram and MRI unremarkable. Chest X-ray revealed bibasalar pneumonia. Initial treatment with vancomycin plus cefepime consolidated to ceftaroline monotherapy, then broadened to daptomycin plus linezolid and piperacillin-tazobactam. Discharged to subacute rehab facility with daptomycin monotherapy for total of 4 weeks. Duration of bacteremia: 8 days.
host_description
pneumonia
host_disease
clinical cure
host_disease_outcome
male
host_sex
BSS051
host_subject_id
B0616, R10206
isolate-name-alias
blood
isolation_source
42.33 N 83.05 W
lat_lon
Staphylococcus aureus
http://purl.obolibrary.org/obo/NCBITaxon_1280
organism
BSN51
strain
Pathogen: clinical or host-associated sample from Staphylococcus aureus
title