SAMN37687740
External Id
Makerere University
INSDC center name
2023-12-30T00:00:00Z
INSDC first public
2023-12-30T10:35:03.006Z
INSDC last update
SRS19067672
INSDC secondary accession
live
INSDC status
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
SRS19067672
SRA accession
Uganda National Health Laboratory Services / Central Public Health Laboratories
collected_by
2023-05
collection_date
Amplicon sequencing of HIV
design_description
HIVDR-1400-23_host_removed_R1.fastq.gz
filename
HIVDR-1400-23_host_removed_R2.fastq.gz
filename2
fastq
filetype
Uganda: Kampala
geo_loc_name
Homo sapiens
host
HIV/AIDS
host_disease
Illumina iSeq 100
instrument_model
whole blood
isolation_source
Missing
lat_lon
HIVDR-1400-23
library_id
paired
library_layout
RT-PCR
library_selection_(click_for_details)
GENOMIC
library_source_(click_for_details)
AMPLICON
library_strategy_(click_for_details)
Human immunodeficiency virus 1
http://purl.obolibrary.org/obo/NCBITaxon_11676
organism
ILLUMINA
platform_(click_for_details)
Human Immunodeficiency Virus 1
strain
HIVDR-1400-23
title
HIV-DRIVES: HIV Drug Resistance Identification, Variant Evaluation, & Surveillance Pipeline
title