SAMN38671668
External Id
Rhode Island Department of Health FDA Wastewater submission group
INSDC center name
2023-12-05T00:00:00Z
INSDC first public
2023-12-05T14:11:19.157Z
INSDC last update
SRS19761925
INSDC secondary accession
live
INSDC status
SARS-CoV-2: wastewater surveillance
NCBI submission model
SARS-CoV-2.wwsurv.1.0
NCBI submission package
SRS19761925
SRA accession
Rhode Island Department of Health
collected_by
2023-09-19
collection_date
RI-1
collection_site_id
1L
collection_volume
ceres nanotrap
concentration_method
RI-RISHL-W0024
description
qiagen qiaamp viral rna mini kit
extraction_method
USA: Rhode Island
geo_loc_name
wastewater
isolation_source
wastewater metagenome
http://purl.obolibrary.org/obo/NCBITaxon_527639
organism
RI wastewater closed pilot
project_name
public health surveillance institution-level
purpose_of_ww_sampling
detection of target by ddPCR
purpose_of_ww_sequencing
Rhode Island Department of Health
sequenced_by
RI-RISHL-W0024
title
pepper mild mottle virus
ww_endog_control_1
NA
ww_population
NA
ww_population_source
24
ww_sample_duration
raw wastewater
ww_sample_matrix
Not Provided
ww_sample_site
composite
ww_sample_type
RI
ww_surv_jurisdiction
SARS-CoV-2
ww_surv_target_1
47.48
ww_surv_target_1_conc
copies/uL
ww_surv_target_1_conc_unit
N gene (N1)
ww_surv_target_1_gene
yes
ww_surv_target_1_known_present
GT-Digital SARS-CoV-2 Wastewater Surveillance Assay For QIAcuity dPCR
ww_surv_target_1_protocol