SAMN38867897
External Id
University of Lethbridge
INSDC center name
2023-12-17T00:00:00Z
INSDC first public
2023-12-29T10:42:22.610Z
INSDC last update
SRS20015308
INSDC secondary accession
live
INSDC status
Model organism or animal
NCBI submission model
Model.organism.animal.1.0
NCBI submission package
SRS20015308
SRA accession
21 dpg
age
not applicable
breed
not applicable
collection_date
not applicable
cultivar
gDNA was quantified using the Quant-iT PicoGreen dsDNA Assay Kit (Life Technologies). Libraries were generated with the NEBNext Ultra II DNA Library Prep Kit for Illumina (New England BioLabs) using 250 ng of input genomic DNA. Adapters were purchased from NEB. Size selection of libraries containing the desired insert size have been performed using sparQ PureMag Beads (Quantabio). Bisulfite conversion had been carried out
design_description
Columbia
ecotype
HI.4834.001.NEBNext_Index_8.6_R1.fastq.gz
filename
HI.4834.001.NEBNext_Index_8.6_R2.fastq.gz
filename2
fastq
filetype
not applicable
geo_loc_name
Illumina HiSeq 2000
instrument_model
not applicable
isolate
HI.4834.001.NEBNext_Index_8.6
library_id
paired
library_layout
RANDOM
library_selection
GENOMIC
library_source
Bisulfite-Seq
library_strategy
Arabidopsis thaliana
http://purl.obolibrary.org/obo/NCBITaxon_3702
organism
ILLUMINA
platform
not applicable
sex
Transgenic line 15d8
strain
Leaf
tissue
Whole genome bisulfite sequencing of heat exposed Arabidopsis thaliana plants
title
F25_cd6_BS
title
Cold stress
treatment