SAMN38748752
External Id
Wayne State University
INSDC center name
2023-12-09T00:00:00Z
INSDC first public
2023-12-11T11:36:44.196Z
INSDC last update
live
INSDC status
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
ERS17478054
SRA accession
GCA_034425575.1
assembly_ID
Andrew D. Berti
collected_by
2020-07-20
collection_date
ST8-MRSA-IVa CC8. spa t008. agr type 1
genotype
Staphylococcus
genus
USA: Detroit, MI
geo_loc_name
Homo sapiens
host
80
host_age
Patient with severe calorie malnutrition, stable small cell carcinoma and acute-on-chronic congestive heart failure presents with shortness of breath. Patient had been admitted previous month for staphylococcal bacteremia related to an infected central line. Patient was persistently bacteremic during the current encounter with magnetic resonance imaging revealing thoracic vertebral osteomyelitis with a paravertebral abscess. Patient was managed medically with daptomycin × 10 weeks and concomitant cefazolin × 4 weeks. Patient was stabilized with clear blood cultures and discharged home with home nursing care. Duration of bacteremia: 18 days.
host_description
spinal osteomyelitis
host_disease
chronic disease
host_disease_outcome
female
host_sex
BSS33
host_subject_id
B0568
isolate-name-alias
blood
isolation_source
42.33 N 83.05 W
lat_lon
Staphylococcus aureus
http://purl.obolibrary.org/obo/NCBITaxon_1280
organism
BSN33
strain
Pathogen: clinical or host-associated sample from Staphylococcus aureus
title