SAMN38754069
External Id
Wayne State University
INSDC center name
2023-12-10T00:00:00Z
INSDC first public
2023-12-11T11:36:44.448Z
INSDC last update
live
INSDC status
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
ERS17900794
SRA accession
GCA_034427355.2
assembly_ID
Andrew D. Berti
collected_by
2020-09-20
collection_date
Other isolates from this patient: BSN41.2, BSN41.3, BSN41.4
description
ST8-MRSA-IVa CC8
genotype
Staphylococcus
genus
USA: Detroit, MI
geo_loc_name
Homo sapiens
host
45
host_age
Patient presented with shortness of breath and hemoptysis secondary to multifocal staphylococcal pneumonia. Patient clinical course was complicated by concomitant staphylococcal bacteremia, acute hypoxic respiratory failure requiring intubation and empyema. Computed tomography revealed multiple loculations consistent with pleural abscesses and left lobular nodules consistent with septic pulmonary emboli. Patient demonstrated significant functional improvement following abscess drainage and video-assisted thoracoscopic surgery was not pursued. Patient was managed medically with vancomycin monotherapy advanced to daptomycin plus ceftaroline and consolidated back to vancomycin monotherapy prior to discharge in stable condition to a skilled nursing facility. Duration of bacteremia: 5 days.
host_description
pneumonia
host_disease
recovery
host_disease_outcome
male
host_sex
BSS41
host_subject_id
B0583
isolate-name-alias
blood
isolation_source
42.33 N 83.05 W
lat_lon
Staphylococcus aureus
http://purl.obolibrary.org/obo/NCBITaxon_1280
organism
BSN41
strain
Pathogen: clinical or host-associated sample from Staphylococcus aureus
title