SAMN38748910
External Id
Oregon State University
INSDC center name
2023-12-16T00:50:14.497Z
INSDC first public
2023-12-16T00:50:14.497Z
INSDC last update
SRS19823341
INSDC secondary accession
live
INSDC status
SARS-CoV-2: wastewater surveillance
NCBI submission model
SARS-CoV-2.wwsurv.1.0
NCBI submission package
SRS19823341
SRA accession
Oregon State University/Oregon Health Authority
collected_by
2023-11-14
collection_date
USA: Oregon
geo_loc_name
wastewater
isolation_source
wastewater metagenome
http://purl.obolibrary.org/obo/NCBITaxon_527639
organism
public health surveillance community-level
purpose_of_ww_sampling
public health surveillance community-level
purpose_of_ww_sequencing
Oregon State University
sequenced_by
SARS-CoV-2: wastewater surveillance sample from wastewater metagenome
title
30775302
ww_flow
45600
ww_population
24
ww_sample_duration
raw wastewater
ww_sample_matrix
wastewater treatment plant
ww_sample_site
composite
ww_sample_type
SARS-CoV-2
ww_surv_target_1
4.262
ww_surv_target_1_conc
copies/L
ww_surv_target_1_conc_unit
N gene (orf9)
ww_surv_target_1_gene
yes
ww_surv_target_1_known_present
Not Provided: ddPCR detection of SARS-CoV-2 using the BioRad nCoV assay on the BioRad QXTwo
ww_surv_target_1_protocol