SAMN38759728
External Id
Wayne State University
INSDC center name
2023-12-11T00:00:00Z
INSDC first public
2023-12-11T11:36:44.469Z
INSDC last update
live
INSDC status
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
ERS17902044
SRA accession
GCA_034424945.2
assembly_ID
Andrew D. Berti
collected_by
2020-09-02
collection_date
Other isolates from this patient: B0588 (05SEP2020 isolate)
description
ST8-MRSA-IVa CC8
genotype
Staphylococcus
genus
USA: Detroit, MI
geo_loc_name
Homo sapiens
host
53
host_age
Patient with history of spinal osteomyelitis and septic arthritis presents with lower back pain following completion of daptomycin therapy for prior infection. Magnetic resonance imaging revealed a lumbar spinal abscess. Transesophageal echocardiogram imaging was unremarkable. Patient was managed surgically with incision and drainage and hemilaminectomy. Medical management included vancomycin with cefazolin transitioned to daptomycin consolidated to linezolid on discharge to skilled nursing facility with planned transition to doxycycline suppressive therapy. Duration of bacteremia: 4 days.
host_description
spinal osteomyelitis
host_disease
chronic disease
host_disease_outcome
female
host_sex
BSS42
host_subject_id
B0587
isolate-name-alias
blood
isolation_source
42.33 N 83.05 W
lat_lon
Staphylococcus aureus
http://purl.obolibrary.org/obo/NCBITaxon_1280
organism
BSN42
strain
Pathogen: clinical or host-associated sample from Staphylococcus aureus
title