SAMN38761805
External Id
Wayne State University
INSDC center name
2023-12-11T00:00:00Z
INSDC first public
2023-12-11T14:06:37.345Z
INSDC last update
live
INSDC status
Pathogen.cl
NCBI submission model
Pathogen.cl.1.0
NCBI submission package
ERS17902095
SRA accession
GCA_034425095.2
assembly_ID
Andrew D. Berti
collected_by
2020-09-21
collection_date
ST5-MRSA-IVg CC5
genotype
Staphylococcus
genus
USA: Detroit, MI
geo_loc_name
Homo sapiens
host
52
host_age
Patient with end-stage renal disease presents with lower back pain and staphylococcal bacteremia secondary to an infected catheter. Magnetic resonance imaging reveales lumbosacral osteomyelitis with epidural phlegmon, abscess and localized arachnoiditis. Surgical management included laminectomy and epidural phlegmon evacuation. Medical management included vancomycin transitioned to daptomycin. Patient was discharged in stable condition to a skilled nursing facility. Duration of bacteremia: 6 days.
host_description
spinal osteomyelitis
host_disease
chronic disease
host_disease_outcome
male
host_sex
BSS44
host_subject_id
B0590
isolate-name-alias
blood
isolation_source
42.33 N 83.05 W
lat_lon
Staphylococcus aureus
http://purl.obolibrary.org/obo/NCBITaxon_1280
organism
BSN44
strain
Pathogen: clinical or host-associated sample from Staphylococcus aureus
title