SAMN39080017
External Id
University of Minnesota
INSDC center name
2023-12-22T00:00:00Z
INSDC first public
2023-12-22T12:28:09.661Z
INSDC last update
live
INSDC status
MIGS/MIMS/MIMARKS.host-associated
NCBI submission model
MIMARKS.survey
NCBI submission model
MIMARKS.survey.host-associated.6.0
NCBI submission package
ERS17943377
SRA accession
not applicable
calving_date
not applicable
collection_date
missing
copy_number_16S
not applicable
days_in_milk
Keywords: GSC:MIxS;MIMARKS:6.0
description
not applicable
env_broad_scale
not applicable
env_local_scale
not applicable
env_medium
not applicable
extraction_date
Other
farm_id
USA
geo_loc_name
Bos taurus
host
not applicable
host_body_habitat
not applicable
host_genotype
not applicable
host_life_stage
not applicable
host_sex
NA
host_subject_id
not applicable
host_taxid
not applicable
lat_lon
24.41
mean_quality
0
megabases
Molecular grade water
neg_cont_type
bovine metagenome
http://purl.obolibrary.org/obo/NCBITaxon_1218275
organism
45.04
percent_gt_q30
0
percent_of_lane
44.75
percent_one_mismatch
55.25
percent_perfect
100
percent_pf
514
pf_clusters
not applicable
pos_cont_type
not applicable
qiacube_batch
not applicable
samp_collect_device
not applicable
samp_mat_process
not applicable
samp_store_temp
Library
sample_type
18
sequencing_batch
missing
technician_id
MIMARKS Survey related sample from bovine metagenome
title