SAMN39055715
External Id
University of Minnesota
INSDC center name
2023-12-21T00:00:00Z
INSDC first public
2023-12-21T18:32:14.340Z
INSDC last update
live
INSDC status
MIGS/MIMS/MIMARKS.host-associated
NCBI submission model
MIMARKS.survey
NCBI submission model
MIMARKS.survey.host-associated.6.0
NCBI submission package
ERS17941286
SRA accession
NA
calving_date
NA
collection_date
NA
copy_number_16S
NA
days_in_milk
Keywords: GSC:MIxS;MIMARKS:6.0
description
not applicable
env_broad_scale
not applicable
env_local_scale
not applicable
env_medium
NA
extraction_date
Other
farm_id
USA
geo_loc_name
not applicable
host
not applicable
host_body_habitat
not applicable
host_genotype
NA
host_life_stage
not applicable
host_sex
NA
host_subject_id
not applicable
host_taxid
not applicable
lat_lon
31.96
mean_quality
11
megabases
Molecular grade water
neg_cont_type
bovine metagenome
http://purl.obolibrary.org/obo/NCBITaxon_1218275
organism
74.75
percent_gt_q30
0.09
percent_of_lane
12.15
percent_one_mismatch
87.85
percent_perfect
100
percent_pf
17641
pf_clusters
not applicable
pos_cont_type
NA
qiacube_batch
not applicable
samp_collect_device
not applicable
samp_mat_process
not applicable
samp_store_temp
Library
sample_type
12
sequencing_batch
missing
technician_id
MIMARKS Survey related sample from bovine metagenome
title