SARS-CoV-2/Human/USA/NY-CDC-LC1075832/2023
External Id
SAMN38916197
External Id
CDC-OAMD
INSDC center name
2023-12-19T00:00:00Z
INSDC first public
2023-12-19T04:01:04.160Z
INSDC last update
SRS19924087
INSDC secondary accession
live
INSDC status
SARS-CoV-2/Human/USA/NY-CDC-LC1075832/2023
Isolate
SARS-CoV-2: clinical or host-associated
NCBI submission model
SARS-CoV-2.cl.1.0
NCBI submission package
SRS19924087
SRA accession
Laboratory Corporation of America
collected_by
2023-12-07
collection_date
Nasal Swabs
collection_device
Nasal Swabs
collection_method
N1 gene
diagnostic_gene_name_1
N2 gene
diagnostic_gene_name_2
RP gene
diagnostic_gene_name_3
19.831
diagnostic_pcr_Ct_value_1
16.79
diagnostic_pcr_Ct_value_2
33.328
diagnostic_pcr_Ct_value_3
Labcorp LDT
diagnostic_pcr_protocol_1
Labcorp LDT
diagnostic_pcr_protocol_2
Labcorp LDT
diagnostic_pcr_protocol_3
USA: New York
geo_loc_name
Homo sapiens
host
85
host_age
COVID-19
host_disease
Unknown
host_race
female
host_sex
Nasal Swabs
isolation_source
JN.1
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
http://purl.obolibrary.org/obo/NCBITaxon_2697049
organism
baseline surveillance (random sampling)
purpose_of_sequencing
CDC Sars CoV2 Sequencing Baseline Constellation
title