characteristics.text: 2012-10-08T17:01:41Z
characteristics.characteristic: ENA-FIRST-PUBLIC
characteristics.text: 2012-10-08T09:39:34Z
characteristics.characteristic: ENA-LAST-UPDATE
characteristics.text: SRA-Webin
characteristics.characteristic: ENA-SUBMISSION-TOOL
characteristics.text: SAMEA1531955
characteristics.characteristic: External Id
characteristics.text: ILLUMINA
characteristics.characteristic: INSDC center name
characteristics.text: 2012-10-08T17:01:41Z
characteristics.characteristic: INSDC first public
characteristics.text: 2012-10-08T09:39:34Z
characteristics.characteristic: INSDC last update
characteristics.text: public
characteristics.characteristic: INSDC status
characteristics.text: ERS179577
characteristics.characteristic: SRA accession
characteristics.text: Platinum2
characteristics.characteristic: Submitter Id
characteristics.text: human
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/NCBITaxon_9606
characteristics.characteristic: common name
characteristics.text: We have generated paired-end sequence data covering the genome of an CEPH female individual to a sequence depth of more than 200-fold using the Illumina HiSeq 2000. This individual is a member of the population samples described in the PhaseI and PhaseII HapMap Projects and is from the CEPH/UTAH pedigree 1463 (abbreviation: CEPH). The DNA identifier for this individual is NA12878. We obtained the DNA sample NA12878 from The Coriell Institute for Medical Research. Starting with 1ug of DNA, and following random fragmentation, we generated a PCR-Free sequencing library with a median insert size of ~300 bp. 100 base sequence reads were generated from both ends of these templates using the Illumina HiSeq 2000. We carried out purity-filtering (PF) to remove mixed reads, where two or more different template molecules are close enough on the surface of the flow-cell to form a mixed or overlapping cluster. No other filtering of the data has been carried out prior to submission. We have also submitted equivalent sequence data for the father and one of the son's of family 1463 (NA12877 and NA12882).
characteristics.characteristic: description
characteristics.text: Homo sapiens
characteristics.characteristic: organism
characteristics.text: Homo sapiens
characteristics.characteristic: scientific_name
characteristics.text: Deep Whole genome sequencing of an CEPH/UTAH female individual (HapMap: NA12878) using the Illumina HiSeq 2000 and paired 100 base reads
characteristics.characteristic: title