characteristics.text: ERC000024
characteristics.characteristic: ENA-CHECKLIST
characteristics.text: 2015-03-14T17:07:39Z
characteristics.characteristic: ENA-FIRST-PUBLIC
characteristics.text: 2016-10-21T09:44:02Z
characteristics.characteristic: ENA-LAST-UPDATE
characteristics.text: SAMEA3299992
characteristics.characteristic: External Id
characteristics.text: Hem. North Gujarat University - India
characteristics.characteristic: INSDC center name
characteristics.text: 2015-03-14T17:07:39Z
characteristics.characteristic: INSDC first public
characteristics.text: 2016-10-21T09:44:02Z
characteristics.characteristic: INSDC last update
characteristics.text: public
characteristics.characteristic: INSDC status
characteristics.text: ERS672496
characteristics.characteristic: SRA accession
characteristics.text: Hot spring microbial communities from Lasundra 11
characteristics.characteristic: Submitter Id
characteristics.text: 2014-10-16
characteristics.characteristic: collection date
characteristics.text: Geothermal areas are the main permanent hot places of the world, and these areas are the major habitats of thermophilic bacteria. In culture independent method, metagenome was isolated using manual and kit based methods. The short gun sequencing of metagenome was performed using Ion torrent PGM platform. The analysis of sequencing data revealed that this spring is dominated by bacterial taxa. MG-RAST based community analysis showed that bacteria were found in dominancy with 99.2% in domain hit distribution. Firmicutes was found to be dominant in domain hit classification followed by proteaobacteria. Moreover, unclassified sequences also found in this metagenome indicate there are possibilities of getting novel organisms.
characteristics.characteristic: description
characteristics.text: Hot spring
characteristics.characteristic: environment (biome)
characteristics.text: Water reservoir
characteristics.characteristic: environment (feature)
characteristics.text: Hot water
characteristics.characteristic: environment (material)
characteristics.text: India
characteristics.characteristic: geographic location (country and/or sea)
characteristics.text: 8
characteristics.unit: m
characteristics.characteristic: geographic location (depth)
characteristics.text: 22.92
characteristics.unit: DD
characteristics.characteristic: geographic location (latitude)
characteristics.text: 73.20
characteristics.unit: DD
characteristics.characteristic: geographic location (longitude)
characteristics.text: metagenome
characteristics.characteristic: investigation type
characteristics.text: hot springs metagenome
characteristics.characteristic: organism
characteristics.text: Metagenomic exploration of Lasundra hot spring
characteristics.characteristic: project name
characteristics.text: hot springs metagenome
characteristics.characteristic: scientific_name
characteristics.text: Ion torrent PGM platform
characteristics.characteristic: sequencing method
characteristics.text: BAM-LASUNDRA
characteristics.characteristic: title
characteristics.text: water
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/CHEBI_15377
characteristics.characteristic: water environmental package