characteristics.text: ERC000011
characteristics.characteristic: ENA-CHECKLIST
characteristics.text: 2017-12-12T17:02:53Z
characteristics.characteristic: ENA-FIRST-PUBLIC
characteristics.text: 2017-03-07T13:50:14Z
characteristics.characteristic: ENA-LAST-UPDATE
characteristics.text: SAMEA103893905
characteristics.characteristic: External Id
characteristics.text: Programme Carte dâ€™Identite des Tumeurs
characteristics.characteristic: INSDC center name
characteristics.text: 2017-12-12T17:02:53Z
characteristics.characteristic: INSDC first public
characteristics.text: 2017-03-07T13:50:14Z
characteristics.characteristic: INSDC last update
characteristics.text: public
characteristics.characteristic: INSDC status
characteristics.text: 0.17
characteristics.characteristic: ProportionMurineRNA
characteristics.text: ERS1583073
characteristics.characteristic: SRA accession
characteristics.text: E-MTAB-5018:PDAC015T
characteristics.characteristic: Submitter Id
characteristics.text: ArrayExpress
characteristics.ontologyTerms: http://www.ebi.ac.uk/efo/EFO_0009737
characteristics.characteristic: broker name
characteristics.text: human
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/NCBITaxon_9606
characteristics.characteristic: common name
characteristics.text: Protocols: two tumor sampling methods from patients with PDAC: 1- surgery for patients with tumor size < 2cm, and 2- Endoscopic Ultrasound-Guided Fine-Needle Aspiration (EUS-FNA) for patients with tumor size > 2cm. this information is given by the \Resectable\ variable. For operated patients (with surgery), tumor tissues were xenografted directly. However, biopsy tissues were grown in culture for 1 or 2 days, before transplanted to the nude mouse. The final xenograft samples were collected from mouse when tumors reached a size of 1 cm. The \Differentiation\, \Fibrosis\, \Inflammation\ information are estimated on the collected xenograft tissues. miRNA-Seq libraries are performed from at least 1ug of extracted total RNA with a RIN greater than 7. Before starting, total RNAs are purified with Trizol-GT & miRNeasy kit wich allows the selection of the small RNA fraction less than 100b.
characteristics.characteristic: description
characteristics.text: pancreatic ductal adenocarcinoma
characteristics.ontologyTerms: http://www.ebi.ac.uk/efo/EFO_0002517
characteristics.characteristic: disease
characteristics.text: PDAC015
characteristics.characteristic: individual
characteristics.text: Homo sapiens
characteristics.characteristic: organism
characteristics.text: Homo sapiens
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/NCBITaxon_9606
characteristics.characteristic: organism
characteristics.text: dead
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/PATO_0001422
characteristics.characteristic: organism status
characteristics.text: true
characteristics.characteristic: resectable
characteristics.text: Homo sapiens
characteristics.characteristic: scientific_name
characteristics.text: male
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/PATO_0000384
characteristics.characteristic: sex
characteristics.text: 9
characteristics.unit: month
characteristics.characteristic: survival time
characteristics.text: PDAC015T
characteristics.characteristic: title
characteristics.text: pancreatic cancer cells grown in nude mouse
characteristics.characteristic: xenograft
characteristics.text: true
characteristics.characteristic: xenograft CIMPclass
characteristics.text: classical
characteristics.characteristic: xenograft MultiOmicsClassification
characteristics.text: mucinous
characteristics.characteristic: xenograft differentiation
characteristics.text: false
characteristics.ontologyTerms: http://www.ebi.ac.uk/efo/EFO_0009639
characteristics.characteristic: xenograft fibrosis
characteristics.text: false
characteristics.ontologyTerms: http://www.ebi.ac.uk/efo/EFO_0009639
characteristics.characteristic: xenograft inflammation