characteristics.text: ERC000011
characteristics.characteristic: ENA-CHECKLIST
characteristics.text: 2019-09-07T04:03:21Z
characteristics.characteristic: ENA-FIRST-PUBLIC
characteristics.text: 2019-11-13T12:14:16Z
characteristics.characteristic: ENA-LAST-UPDATE
characteristics.text: SAMEA5938961
characteristics.characteristic: External Id
characteristics.text: PANGAEA Data Publisher for Earth and Environmental Science
characteristics.characteristic: INSDC center name
characteristics.text: 2019-09-07T04:03:21Z
characteristics.characteristic: INSDC first public
characteristics.text: 2019-11-13T12:14:16Z
characteristics.characteristic: INSDC last update
characteristics.text: public
characteristics.characteristic: INSDC status
characteristics.text: ERS3727431
characteristics.characteristic: SRA accession
characteristics.text: eDNAB0003205
characteristics.characteristic: Submitter Id
characteristics.text: not-available
characteristics.ontologyTerms: http://www.ebi.ac.uk/efo/EFO_0001071
characteristics.characteristic: access and benefit sharing, agreements and permits
characteristics.text: not-available
characteristics.ontologyTerms: http://www.ebi.ac.uk/efo/EFO_0001071
characteristics.characteristic: access and benefit sharing, relevant Nagoya protocol
characteristics.text: not-available
characteristics.characteristic: access and benefit sharing, sampled in Exclusive Economic Zone (EEZ)
characteristics.text: Stephane PESANT
characteristics.characteristic: broker name
characteristics.text: not-available
characteristics.ontologyTerms: http://www.ebi.ac.uk/efo/EFO_0001071
characteristics.characteristic: collected by
characteristics.text: Five different metazoan mock communities were prepared using standardized 10 ng/µL DNA extracts of ten deep-sea specimens belonging to five taxonomic groups (Polychaeta, Crustacea, Anthozoa, Bivalvia, Gastropoda). The mock communities differed in terms of relative proportions of total genomic DNA from each species, spanning from an equimolar community (Mock-1) to increasingly unbalanced communities, with increasing dominance of three species (Mock-2 to Mock-5). The composition of Mock-2 is Polychaeta; Eunicida; Eunice norvegica (28%), Crustacea; Malacostraca; Rimicaris sp. (formerly Chorocaris sp.) (8%), Crustacea; Malacostraca; Alvinocaris muricola (8%), Crustacea; Malacostraca; Munidopsis sp. (8%), Anthozoa; Alcyonacea; Acanella arbuscula (8%), Anthozoa; Scleractinia; Caryophylliidae; Desmophyllum dianthus (8%), Bivalvia; Veneroida; Vesicomyidae; Calyptogena pacifica (8%), Bivalvia; Veneroida; Vesicomyidae; Christineconcha regab (formerly Calyptogena sp.) (8%), Bivalvia; Veneroida; Vesicomyidae; Vesicomya gigas (8%), Gastropoda; Patellogastropoda; Paralepetopsis sp. (8%)
characteristics.characteristic: comment
characteristics.text: not-provided
characteristics.unit: µmol/kg
characteristics.characteristic: environmental condition, oxygen
characteristics.text: not-provided
characteristics.characteristic: environmental condition, pH
characteristics.text: not-provided
characteristics.unit: practical salinity unit
characteristics.characteristic: environmental condition, salinity
characteristics.text: not-provided
characteristics.unit: Celsius
characteristics.characteristic: environmental condition, temperature
characteristics.text: not-available
characteristics.ontologyTerms: http://www.ebi.ac.uk/efo/EFO_0001071
characteristics.characteristic: environmental material (ENVO:00010483)
characteristics.text: not-provided
characteristics.characteristic: environmental material label
characteristics.text: not-available
characteristics.unit: centimetre
characteristics.characteristic: environmental material, depth above sediment surface, bottom
characteristics.text: not-available
characteristics.unit: centimetre
characteristics.characteristic: environmental material, depth above sediment surface, top
characteristics.text: not-available
characteristics.unit: centimetre
characteristics.characteristic: environmental material, depth below sediment surface, bottom
characteristics.text: not-available
characteristics.unit: centimetre
characteristics.characteristic: environmental material, depth below sediment surface, top
characteristics.text: not-available
characteristics.unit: litre
characteristics.characteristic: environmental material, quantity, volume
characteristics.text: not-available
characteristics.unit: kilogram
characteristics.characteristic: environmental material, quantity, weight
characteristics.text: not-available
characteristics.ontologyTerms: http://www.ebi.ac.uk/efo/EFO_0001071
characteristics.characteristic: environmental system, biome (ENVO:00000428)
characteristics.text: not-available
characteristics.ontologyTerms: http://www.ebi.ac.uk/efo/EFO_0001071
characteristics.characteristic: environmental system, feature (ENVO:00002297)
characteristics.text: not-available
characteristics.ontologyTerms: http://www.ebi.ac.uk/efo/EFO_0001071
characteristics.characteristic: environmental system, marine region
characteristics.text: eDNABYSS has received funding from Ifremer through project Pourquoi pas les Abysses, as well as ship time and transit time from the French Fleet Commission.
characteristics.characteristic: funding acknowledgements
characteristics.text: eDNABYSS has received funding from France Genomique (ANR-10-INBS-09) and Genoscope-CEA
characteristics.characteristic: funding acknowledgements
characteristics.text: The curation of eDNABYSS provenance metadata was funded by the European Union’s Horizon 2020 research and innovation programme under grant agreement No 678760 (ATLAS). This output reflects only the author’s view and the European Union cannot be held responsible for any use that may be made of the information contained therein.
characteristics.characteristic: funding acknowledgements
characteristics.text: 2019-07-01Z
characteristics.characteristic: last update date
characteristics.text: marine metagenome
characteristics.characteristic: organism
characteristics.text: eDNABYSS
characteristics.characteristic: project name
characteristics.text: Five different metazoan mock communities were prepared using standardized 10 ng/µL DNA extracts of ten deep-sea specimens belonging to five taxonomic groups (Polychaeta, Crustacea, Anthozoa, Bivalvia, Gastropoda). The mock communities differed in terms of relative proportions of total genomic DNA from each species, spanning from an equimolar community (Mock-1) to increasingly unbalanced communities, with increasing dominance of three species (Mock-2 to Mock-5). The composition of Mock-2 is Polychaeta; Eunicida; Eunice norvegica (28%), Crustacea; Malacostraca; Rimicaris sp. (formerly Chorocaris sp.) (8%), Crustacea; Malacostraca; Alvinocaris muricola (8%), Crustacea; Malacostraca; Munidopsis sp. (8%), Anthozoa; Alcyonacea; Acanella arbuscula (8%), Anthozoa; Scleractinia; Caryophylliidae; Desmophyllum dianthus (8%), Bivalvia; Veneroida; Vesicomyidae; Calyptogena pacifica (8%), Bivalvia; Veneroida; Vesicomyidae; Christineconcha regab (formerly Calyptogena sp.) (8%), Bivalvia; Veneroida; Vesicomyidae; Vesicomya gigas (8%), Gastropoda; Patellogastropoda; Paralepetopsis sp. (8%)
characteristics.characteristic: sample description
characteristics.text: not-available
characteristics.ontologyTerms: http://www.ebi.ac.uk/efo/EFO_0001071
characteristics.characteristic: sample protocol, chemical treatment
characteristics.text: not-provided
characteristics.characteristic: sample protocol, description
characteristics.text: SEQ-METAB_MOCK-2
characteristics.characteristic: sample protocol, label
characteristics.text: not-provided
characteristics.unit: micrometre
characteristics.characteristic: sample protocol, size fraction lower threshold
characteristics.text: not-provided
characteristics.characteristic: sample protocol, size fraction lower threshold, device
characteristics.text: not-provided
characteristics.unit: micrometre
characteristics.characteristic: sample protocol, size fraction upper threshold
characteristics.text: not-provided
characteristics.characteristic: sample protocol, size fraction upper threshold, device
characteristics.text: metabarcoding analysis
characteristics.characteristic: sample protocol, target analysis
characteristics.text: not-available
characteristics.ontologyTerms: http://www.ebi.ac.uk/efo/EFO_0001071
characteristics.characteristic: sample protocol, temperature treatment
characteristics.text: Mock2
characteristics.ontologyTerms: http://www.ebi.ac.uk/efo/EFO_0001461
characteristics.characteristic: sample storage, container label
characteristics.text: not-available
characteristics.ontologyTerms: http://www.ebi.ac.uk/efo/EFO_0001071
characteristics.characteristic: sample storage, container type
characteristics.text: not-available
characteristics.ontologyTerms: http://www.ebi.ac.uk/efo/EFO_0001071
characteristics.characteristic: sample storage, location
characteristics.text: not-available
characteristics.ontologyTerms: http://www.ebi.ac.uk/efo/EFO_0001071
characteristics.characteristic: sampling campaign, label
characteristics.text: not-available
characteristics.ontologyTerms: http://www.ebi.ac.uk/efo/EFO_0001071
characteristics.characteristic: sampling campaign, plateform
characteristics.text: not-available
characteristics.ontologyTerms: http://www.ebi.ac.uk/efo/EFO_0001071
characteristics.characteristic: sampling campaign, report
characteristics.text: 9999-99-99T99:99Z
characteristics.unit: yyyy-mm-ddThh:mmZ
characteristics.characteristic: sampling event, date-time, start
characteristics.text: not-available
characteristics.unit: yyyy-mm-ddThh:mmZ
characteristics.characteristic: sampling event, date/time, end
characteristics.text: not-available
characteristics.unit: centimetre squared
characteristics.characteristic: sampling event, device collection area
characteristics.text: no-sampling-device
characteristics.characteristic: sampling event, device label
characteristics.text: not-available
characteristics.unit: metre
characteristics.characteristic: sampling event, elevation, depth below sea surface
characteristics.text: GENOSCOPE_9999-99-99T99:99Z_in-the-lab_mock-community_no-sampling-device
characteristics.unit: campaign_datetime_station_event_device
characteristics.characteristic: sampling event, label
characteristics.text: not-available
characteristics.unit: dd.dddd
characteristics.characteristic: sampling event, latitude, end
characteristics.text: not-available
characteristics.unit: dd.dddd
characteristics.characteristic: sampling event, latitude, start
characteristics.text: not-available
characteristics.unit: ddd.dddd
characteristics.characteristic: sampling event, longitude, end
characteristics.text: not-available
characteristics.unit: ddd.dddd
characteristics.characteristic: sampling event, longitude, start
characteristics.text: GENOSCOPE_in-the-lab
characteristics.unit: campaign-code_station-code
characteristics.characteristic: sampling station, label
characteristics.text: marine metagenome
characteristics.characteristic: scientific_name
characteristics.text: GENOSCOPE_in-the-lab_mock-community_MOCK-2
characteristics.characteristic: title