characteristics.text: ERC000011
characteristics.characteristic: ENA-CHECKLIST
characteristics.text: 2022-06-14T00:18:13Z
characteristics.characteristic: ENA-FIRST-PUBLIC
characteristics.text: 2022-06-14T00:18:13Z
characteristics.characteristic: ENA-LAST-UPDATE
characteristics.text: SAMEA10332717
characteristics.characteristic: External Id
characteristics.text: ROTHAMSTED RESEARCH
characteristics.characteristic: INSDC center name
characteristics.text: 2022-06-14T00:18:13Z
characteristics.characteristic: INSDC first public
characteristics.text: 2022-06-14T00:18:13Z
characteristics.characteristic: INSDC last update
characteristics.text: public
characteristics.characteristic: INSDC status
characteristics.text: ERS7987468
characteristics.characteristic: SRA accession
characteristics.text: Nezara_viridula_genome
characteristics.characteristic: Submitter Id
characteristics.text: 2008
characteristics.characteristic: collection date
characteristics.text: southern green stink bug
characteristics.characteristic: common name
characteristics.text: Annotated genome of Nezara viridula from the Pest Genomics Initiative. Single individual CLR Nezara viridula genome assembly using Falcon with haplotig removal. Manual curation and Hi-C to scaffold to chromosome level. Pilon used for error correction so may be some minor gains using freebayes to update. The result was a very good assembly. Additional RNA-seq data would benefit the annotation and improve further. Maker annotation pipeline used with both transcriptome transfer and de novo gene prediction as inputs to Evigene to pick best gene models. Curation of P450, ABC, UGT, IRAC gene models where RNA-seq evidence was present. PacBio CLR reads for the Nezara viridula genome. Unknown sex individual taken for CLR PacBio and 10X, multi-individual for Hi-C sequencing. Insecticide suseptible individuals.
characteristics.characteristic: description
characteristics.text: France
characteristics.characteristic: geographic location (country and/or sea)
characteristics.text: Nezara viridula
characteristics.characteristic: organism
characteristics.text: Nezara viridula
characteristics.characteristic: scientific_name
characteristics.text: Annotated genome assembly of Nezara viridula genome from the Pest Genomics Initiative.
characteristics.characteristic: title