characteristics.text: ERC000011
characteristics.characteristic: ENA-CHECKLIST
characteristics.text: 2022-06-14T00:18:13Z
characteristics.characteristic: ENA-FIRST-PUBLIC
characteristics.text: 2022-06-14T00:18:13Z
characteristics.characteristic: ENA-LAST-UPDATE
characteristics.text: SAMEA10332735
characteristics.characteristic: External Id
characteristics.text: ROTHAMSTED RESEARCH
characteristics.characteristic: INSDC center name
characteristics.text: 2022-06-14T00:18:13Z
characteristics.characteristic: INSDC first public
characteristics.text: 2022-06-14T00:18:13Z
characteristics.characteristic: INSDC last update
characteristics.text: public
characteristics.characteristic: INSDC status
characteristics.text: ERS7987486
characteristics.characteristic: SRA accession
characteristics.text: Phaedon cochleariae_genome
characteristics.characteristic: Submitter Id
characteristics.text: 1961
characteristics.characteristic: collection date
characteristics.text: mustard beetle
characteristics.characteristic: common name
characteristics.text: Annotated genome assembly of Phaedon cochleariae. HiFi data assembled using Hifiasm. Haplotigs purged. Freebayes route used for error correction with Hi-C data and Hi-C used to produce chromosome level assembly with juicer/3d-dna. Maker annotation pipeline used with both transcriptome transfer and de novo gene prediction as inputs to Evigene to pick best gene models. Curation of P450, ABC, UGT, IRAC gene models where RNA-seq evidence was present. Single individual, unknown sex used for HiFi PacBio and Hi-C Illumina reads. Sample taken on 01.02.1961; UK; England (Rothamsted Experimental Station)
characteristics.characteristic: description
characteristics.text: United Kingdom
characteristics.characteristic: geographic location (country and/or sea)
characteristics.text: Phaedon cochleariae
characteristics.characteristic: organism
characteristics.text: Phaedon cochleariae
characteristics.characteristic: scientific_name
characteristics.text: Annotated genome assembly of Phaedon cochleariae from the Pest Genomics Initiative.
characteristics.characteristic: title