characteristics.text: ERC000011
characteristics.characteristic: ENA-CHECKLIST
characteristics.text: 2022-06-14T00:18:13Z
characteristics.characteristic: ENA-FIRST-PUBLIC
characteristics.text: 2022-06-14T00:18:13Z
characteristics.characteristic: ENA-LAST-UPDATE
characteristics.text: SAMEA10332715
characteristics.characteristic: External Id
characteristics.text: ROTHAMSTED RESEARCH
characteristics.characteristic: INSDC center name
characteristics.text: 2022-06-14T00:18:13Z
characteristics.characteristic: INSDC first public
characteristics.text: 2022-06-14T00:18:13Z
characteristics.characteristic: INSDC last update
characteristics.text: public
characteristics.characteristic: INSDC status
characteristics.text: ERS7987466
characteristics.characteristic: SRA accession
characteristics.text: Phyllotreta_striolata_genome
characteristics.characteristic: Submitter Id
characteristics.text: 2020
characteristics.characteristic: collection date
characteristics.text: stripe beetle
characteristics.characteristic: common name
characteristics.text: Annotated genome assembly of Phyllotreta striolata. HiFiasm used to assemble HiFi reads and haplotigs purged. Manual curation and Hi-C to bring to chromosome level. Single primary sequence assembly, not haplotype assembled. Maker annotation pipeline used with both transcriptome transfer and de novo gene prediction as inputs to Evigene to pick best gene models. Curation of P450, ABC, UGT, IRAC gene models where RNA-seq evidence was present. Single individual, unknown sex used for HiFi PacBio and Hi-C Illumina reads. Mixed sample with Phyllotreta cruciferae. taken from Canada in September 2020.
characteristics.characteristic: description
characteristics.text: Canada
characteristics.characteristic: geographic location (country and/or sea)
characteristics.text: Phyllotreta striolata
characteristics.characteristic: organism
characteristics.text: Phyllotreta striolata
characteristics.characteristic: scientific_name
characteristics.text: Annotated genome assembly of Phyllotreta striolata from the Pest Genomics Initiative.
characteristics.characteristic: title