ERC000047
ENA-CHECKLIST
2022-08-10T16:27:24Z
ENA-FIRST-PUBLIC
2022-08-10T16:27:24Z
ENA-LAST-UPDATE
SAMEA110089124
External Id
NIH/NHGRI
INSDC center name
2022-08-10T16:27:24Z
INSDC first public
2022-08-10T16:27:24Z
INSDC last update
public
INSDC status
ERS12187941
SRA accession
qXZqxwx2vr_bin.2.MAG
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes v.3.13.0
assembly software
MaxBin2, MetaBat2, Concoct with default parameter of the Metawrap pipeline. Bin refinement module used from metawrap with default parameters
binning parameters
metaWRAP v1.2.1
binning software
2015-01-01
collection date
85.08
%
completeness score
CheckM v1.1.2
completeness software
85.08
%
contamination score
This sample represents a Per Sample Metagenome-Assembled Genome (MAG) from the metagenomic run(s): SRR8782009.
description
human-associated habitat
environment (biome)
human skin
environment (feature)
skin
environment (material)
USA
geographic location (country and/or sea)
38.984653
DD
geographic location (latitude)
-77.09471
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
human skin
isolation source
human skin metagenome
metagenomic source
Acidaminococcus intestini
organism
Skin Microbial Genome Catalogue
project name
SAMN10870911
sample derived from
Acidaminococcus intestini
scientific_name
Illumina
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: qXZqxwx2vr_bin.2.MAG
title