characteristics.text: ERC000047
characteristics.characteristic: ENA-CHECKLIST
characteristics.text: 2022-08-24T12:18:12Z
characteristics.characteristic: ENA-FIRST-PUBLIC
characteristics.text: 2022-08-24T12:18:12Z
characteristics.characteristic: ENA-LAST-UPDATE
characteristics.text: SAMEA110698768
characteristics.characteristic: External Id
characteristics.text: EMG
characteristics.characteristic: INSDC center name
characteristics.text: 2022-08-24T12:18:12Z
characteristics.characteristic: INSDC first public
characteristics.text: 2022-08-24T12:18:12Z
characteristics.characteristic: INSDC last update
characteristics.text: public
characteristics.characteristic: INSDC status
characteristics.text: ERS12796306
characteristics.characteristic: SRA accession
characteristics.text: ERR5385020_bin.4_metawrap_v1.3.0_MAG
characteristics.characteristic: Submitter Id
characteristics.text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
characteristics.characteristic: assembly quality
characteristics.text: metaSPAdes v3.15.3
characteristics.characteristic: assembly software
characteristics.text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.
characteristics.characteristic: binning parameters
characteristics.text: metawrap v1.3.0
characteristics.characteristic: binning software
characteristics.text: plant
characteristics.characteristic: broad-scale environmental context
characteristics.text: EBI-EMG
characteristics.characteristic: broker name
characteristics.text: 2017-10-17
characteristics.characteristic: collection date
characteristics.text: 60.94
characteristics.unit: %
characteristics.characteristic: completeness score
characteristics.text: CheckM
characteristics.characteristic: completeness software
characteristics.text: 0.22
characteristics.unit: %
characteristics.characteristic: contamination score
characteristics.text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run ERR5385020 of study ERP113334.
characteristics.characteristic: description
characteristics.text: rhizosphere
characteristics.characteristic: environmental medium
characteristics.text: United Kingdom
characteristics.characteristic: geographic location (country and/or sea)
characteristics.text: 56.45139
characteristics.unit: DD
characteristics.characteristic: geographic location (latitude)
characteristics.text: 3.074722
characteristics.unit: DD
characteristics.characteristic: geographic location (longitude)
characteristics.text: metagenome-assembled genome
characteristics.characteristic: investigation type
characteristics.text: rhizosphere metagenome
characteristics.characteristic: isolation_source
characteristics.text: barley
characteristics.characteristic: local environmental context
characteristics.text: rhizosphere metagenome
characteristics.characteristic: metagenomic source
characteristics.text: uncultured Caulobacteraceae bacterium
characteristics.characteristic: organism
characteristics.text: The microbiota populating the rhizosphere, the interface between roots and soil, can modulate plant growth, development and health. These microbial communities are not stochastically assembled from the surrounding soil but their composition and function is controlled, at least partially, by the host plant. Here we use the staple cereal barley as a model to gain novel insights into the impact of differential applications of nitrogen, a rate-limiting step for global crop production, on the host genetic control of the rhizosphere microbiota. This library contains shotgun metagenomics sequencing from bulk (quarryfield) soil, a modern elite line (Morex) and two wild genotypes: B1K-12 (referered to as Desert), and B1K-31 (referred to as &apos;North&apos;)
characteristics.characteristic: project name
characteristics.text: SAMEA8103254
characteristics.characteristic: sample derived from
characteristics.text: uncultured Caulobacteraceae bacterium
characteristics.characteristic: scientific_name
characteristics.text: NextSeq 500
characteristics.characteristic: sequencing method
characteristics.text: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__;s__
characteristics.characteristic: taxonomic classification
characteristics.text: multi-marker approach
characteristics.characteristic: taxonomic identity marker
characteristics.text: Metagenome-assembled genome: ERR5385020_bin.4_metawrap_v1.3.0_MAG
characteristics.characteristic: title