characteristics: ERC000047
characteristics: ENA-CHECKLIST
characteristics: 2022-10-17T00:34:45Z
characteristics: ENA-FIRST-PUBLIC
characteristics: 2022-10-17T00:34:45Z
characteristics: ENA-LAST-UPDATE
characteristics: SAMEA111477429
characteristics: External Id
characteristics: EMG
characteristics: INSDC center name
characteristics: 2022-10-17T00:34:45Z
characteristics: INSDC first public
characteristics: 2022-10-17T00:34:45Z
characteristics: INSDC last update
characteristics: public
characteristics: INSDC status
characteristics: ERS13571465
characteristics: SRA accession
characteristics: SRR7610115_bin.1_metaWRAP_v1.3_MAG
characteristics: Submitter Id
characteristics: Many fragments with little to no review of assembly other than reporting of standard assembly statistics
characteristics: assembly quality
characteristics: metaSPAdes v3.15.3
characteristics: assembly software
characteristics: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.
characteristics: binning parameters
characteristics: metaWRAP v1.3
characteristics: binning software
characteristics: Fish digestive system
characteristics: broad-scale environmental context
characteristics: EBI-EMG
characteristics: broker name
characteristics: 2016-03-23
characteristics: collection date
characteristics: 92.95
characteristics: %
characteristics: completeness score
characteristics: CheckM
characteristics: completeness software
characteristics: 1.01
characteristics: %
characteristics: contamination score
characteristics: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR7610115 of study SRP155478.
characteristics: description
characteristics: Gut content
characteristics: environmental medium
characteristics: Brazil
characteristics: geographic location (country and/or sea)
characteristics: not provided
characteristics: DD
characteristics: geographic location (latitude)
characteristics: not provided
characteristics: DD
characteristics: geographic location (longitude)
characteristics: metagenome-assembled genome
characteristics: investigation type
characteristics: fish gut metagenome
characteristics: isolation_source
characteristics: Gut
characteristics: local environmental context
characteristics: fish gut metagenome
characteristics: metagenomic source
characteristics: uncultured Bacteroides sp.
characteristics: organism
characteristics: Influence of florfenicol, a broad-spectrum fluorine derivative of chloramphenicol, which is one of the most frequently used antibiotic in aquaculture, on the composition, function and distribution of ARGs and MGEs in the gut microbiome of Piaractus mesopotamicus,
characteristics: project name
characteristics: SAMN09711566
characteristics: sample derived from
characteristics: uncultured Bacteroides sp.
characteristics: scientific_name
characteristics: Illumina MiSeq
characteristics: sequencing method
characteristics: The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__
characteristics: taxonomic classification
characteristics: multi-marker approach
characteristics: taxonomic identity marker
characteristics: Metagenome-assembled genome: SRR7610115_bin.1_metaWRAP_v1.3_MAG
characteristics: title