ERC000011
ENA-CHECKLIST
2023-04-28T16:20:26Z
ENA-FIRST-PUBLIC
2023-04-28T16:20:26Z
ENA-LAST-UPDATE
SAMEA112990846
External Id
UCSDMI
INSDC center name
2023-04-28T16:20:26Z
INSDC first public
2023-04-28T16:20:26Z
INSDC last update
public
INSDC status
ERS14985869
SRA accession
qiita_sid_10317:10317.X00185562
Submitter Id
i do not have this condition
acid_reflux
no
acne_medication
no
acne_medication_otc
i do not have this condition
add_adhd
50s
age_cat
yes
alcohol_consumption
regularly (3-5 times/week)
alcohol_frequency
true
alcohol_types_beercider
false
alcohol_types_red_wine
false
alcohol_types_sour_beers
true
alcohol_types_spiritshard_alcohol
false
alcohol_types_unspecified
true
alcohol_types_white_wine
true
allergic_to_i_have_no_food_allergies_that_i_know_of
false
allergic_to_peanuts
false
allergic_to_shellfish
false
allergic_to_tree_nuts
false
allergic_to_unspecified
i do not have this condition
alzheimers
X00185562
anonymized_name
i have not taken antibiotics in the past year.
antibiotic_history
no
appendix_removed
occasionally (1-2 times/week)
artificial_sweeteners
i do not have this condition
asd
i do not have this condition
autoimmune
rarely (less than once/week)
beet_frequency
1966
birth_year
obese
bmi_cat
less than one
bowel_movement_frequency
i tend to have normal formed stool - type 3 and 4
bowel_movement_quality
no
breastmilk_formula_ensure
i do not have this condition
cancer
i do not have this condition
cardiovascular_disease
yes
cat
i do not have this condition
cdiff
yes
chickenpox
diagnosed by a medical professional (doctor, physician assistant)
clinical_condition
2021-05-03t08:00:00
collection_timestamp
yes
consume_animal_products_abx
no
contraceptive
never
cosmetics_frequency
united states
country_of_birth
united states
country_residence
more than half the days
covid_anxious
false
covid_chronic_conditions_any_autoimmune_disease
false
covid_chronic_conditions_arthritis
false
covid_chronic_conditions_asthma_or_other_lung_problems
false
covid_chronic_conditions_atrial_fibrillation_or_atrial_flutter
false
covid_chronic_conditions_cancer
false
covid_chronic_conditions_chronic_obstructive_pulmonary_disease_copd
false
covid_chronic_conditions_congestive_heart_failure
false
covid_chronic_conditions_deep_vein_thrombosis
true
covid_chronic_conditions_diabetes_or_high_blood_sugar
false
covid_chronic_conditions_epilepsy_or_seizures
false
covid_chronic_conditions_frequent_or_very_bad_headaches
false
covid_chronic_conditions_heart_disease__myocardial_infarction
false
covid_chronic_conditions_heart_problems
false
covid_chronic_conditions_hiv
true
covid_chronic_conditions_hypertension
false
covid_chronic_conditions_immune_disorder
false
covid_chronic_conditions_kidney_problems
false
covid_chronic_conditions_pulmonary_embolism
false
covid_chronic_conditions_seasonal_allergies
false
covid_chronic_conditions_serious_acne_or_skin_problems
false
covid_chronic_conditions_serious_stomach_or_bowel_problems
false
covid_chronic_conditions_stroke
false
covid_chronic_conditions_unspecified
one or two days
covid_depressed
moderate
covid_difficulty_staying_asleep
false
covid_family_members_fallen_ill_physically
false
covid_family_members_hospitalized
false
covid_family_members_lost_job
false
covid_family_members_none_of_the_above
false
covid_family_members_passed_away
true
covid_family_members_put_into_self_quarantine_with_symptoms
false
covid_family_members_put_into_self_quarantine_without_symptoms_eg_due_to_possible_exposure
false
covid_family_members_reduced_ability_to_earn_money
false
covid_family_members_unspecified
false
covid_happened_to_you_fallen_ill_physically
false
covid_happened_to_you_hospitalized
false
covid_happened_to_you_lost_job
false
covid_happened_to_you_none_of_the_above
true
covid_happened_to_you_put_into_self_quarantine_with_symptoms
false
covid_happened_to_you_put_into_self_quarantine_without_symptoms_eg_due_to_possible_exposure
false
covid_happened_to_you_reduced_ability_to_earn_money
false
covid_happened_to_you_unspecified
not at all
covid_interest_pleasure
every day
covid_left_home
good
covid_level_of_wellbeing
false
covid_likely_exposure_no
false
covid_likely_exposure_unspecified
false
covid_likely_exposure_yes_someone_with_medical_diagnosis_but_no_test
true
covid_likely_exposure_yes_someone_with_positive_test
false
covid_likely_exposure_yes_someone_with_possible_symptoms_but_no_diagnosis_by_doctor
no
covid_patient_care
not at all
covid_quality_of_life
no
covid_rideshare
not at all
covid_sleep_interference
moderately satisfied
covid_sleep_pattern
yes, with a positive test
covid_suspected_positive
false
covid_symptoms_chest_pain_or_tightness_in_chest
false
covid_symptoms_cough
false
covid_symptoms_diarrhea
false
covid_symptoms_fatigue
true
covid_symptoms_fever
true
covid_symptoms_lack_of_appetitie
true
covid_symptoms_loss_of_taste_or_smell
false
covid_symptoms_nausea
false
covid_symptoms_shortness_of_breath
false
covid_symptoms_sore_throat
yes
covid_symptoms_stay_home
false
covid_symptoms_unspecified
mild
covid_waking_up_early
not at all
covid_worried_sleep
one or two days
covid_worrying
no
csection
i use an antiperspirant
deodorant_use
american gut project stool sample
description
diagnosed by a medical professional (doctor, physician assistant)
diabetes
type ii diabetes
diabetes_type
omnivore
diet_type
true
dna_extracted
no
dog
i am right handed
dominant_hand
city
drinking_water_source
1-2
drinks_per_session
host-associated
empo_1
animal
empo_2
animal distal gut
empo_3
dense settlement biome
env_biome
human-associated habitat
env_feature
feces
env_material
human-gut
env_package
i do not have this condition
epilepsy_or_seizure_disorder
occasionally (1-2 times/week)
exercise_frequency
outdoors
exercise_location
primarily breast milk
fed_as_infant
false
fermented_consumed_beer
false
fermented_consumed_chicha
false
fermented_consumed_cider
false
fermented_consumed_cottage_cheese
false
fermented_consumed_fermented_beansmisonatto
false
fermented_consumed_fermented_breadsourdoughinjera
false
fermented_consumed_fermented_fish
false
fermented_consumed_fermented_tofu
false
fermented_consumed_fish_sauce
false
fermented_consumed_kefir_milk
false
fermented_consumed_kefir_water
false
fermented_consumed_kimchi
false
fermented_consumed_kombucha
false
fermented_consumed_mead
false
fermented_consumed_pickled_vegetables
false
fermented_consumed_sauerkraut
false
fermented_consumed_sour_creamcreme_fraiche
false
fermented_consumed_tempeh
false
fermented_consumed_unspecified
false
fermented_consumed_wine
false
fermented_consumed_yogurtlassi
never
fermented_plant_frequency
false
fermented_produce_commercial_beer
false
fermented_produce_commercial_chicha
false
fermented_produce_commercial_cider
false
fermented_produce_commercial_cottage_cheese
false
fermented_produce_commercial_fermented_beansmisonatto
false
fermented_produce_commercial_fermented_breadsourdoughinjera
false
fermented_produce_commercial_fermented_fish
false
fermented_produce_commercial_fermented_tofu
false
fermented_produce_commercial_fish_sauce
false
fermented_produce_commercial_kefir_milk
false
fermented_produce_commercial_kefir_water
false
fermented_produce_commercial_kimchi
false
fermented_produce_commercial_kombucha
false
fermented_produce_commercial_mead
false
fermented_produce_commercial_pickled_vegetables
false
fermented_produce_commercial_sauerkraut
false
fermented_produce_commercial_sour_creamcreme_fraiche
false
fermented_produce_commercial_tempeh
false
fermented_produce_commercial_unspecified
false
fermented_produce_commercial_wine
false
fermented_produce_commercial_yogurtlassi
false
fermented_produce_personal_beer
false
fermented_produce_personal_chicha
false
fermented_produce_personal_cider
false
fermented_produce_personal_cottage_cheese
false
fermented_produce_personal_fermented_beansmisonatto
false
fermented_produce_personal_fermented_breadsourdoughinjera
false
fermented_produce_personal_fermented_fish
false
fermented_produce_personal_fermented_tofu
false
fermented_produce_personal_fish_sauce
false
fermented_produce_personal_kefir_milk
false
fermented_produce_personal_kefir_water
false
fermented_produce_personal_kimchi
false
fermented_produce_personal_kombucha
false
fermented_produce_personal_mead
false
fermented_produce_personal_pickled_vegetables
false
fermented_produce_personal_sauerkraut
false
fermented_produce_personal_sour_creamcreme_fraiche
false
fermented_produce_personal_tempeh
false
fermented_produce_personal_unspecified
false
fermented_produce_personal_wine
false
fermented_produce_personal_yogurtlassi
rarely (a few times/month)
flossing_frequency
year
flu_vaccine_date
rarely (less than once/week)
frozen_dessert_frequency
rarely (less than once/week)
fruit_frequency
i do not have this condition
fungal_overgrowth
no
gluten
regularly (3-5 times/week)
high_fat_red_meat_frequency
daily
homecooked_meals_frequency
54.9
host_age
54.9
host_age_normalized_years
years
host_age_units
uberon:feces
host_body_habitat
33.2
host_body_mass_index
uberon:feces
host_body_product
uberon:feces
host_body_site
human
host_common_name
195.58
host_height
cm
host_height_units
['04433bae0a7f345c76d670aafda25f7ede19a3a92b85cbca85ff0368b8cd110ff4e962acd68b573affbceb38ee6e3dd6cd370fe1b07f8f75ac69ae4323c6574d']
host_subject_id
9606
host_taxid
127.00601464197912
host_weight
kg
host_weight_units
i do not have this condition
ibd
i do not have this condition
ibs
i do not have this condition
kidney_disease
no
lactose
i have lived in my current state of residence for more than a year.
last_move
i have not been outside of my country of residence in the past year.
last_travel
graduate or professional degree
level_of_education
adult
lifestage
i do not have this condition
liver_disease
no
livingwith
i do not have this condition
lung_disease
daily
meat_eggs_frequency
no
mental_illness
false
mental_illness_type_anorexia_nervosa
false
mental_illness_type_bipolar_disorder
false
mental_illness_type_bulimia_nervosa
false
mental_illness_type_depression
false
mental_illness_type_ptsd_post_traumatic_stress_disorder
false
mental_illness_type_schizophrenia
false
mental_illness_type_substance_abuse
false
mental_illness_type_unspecified
i do not have this condition
migraine
regularly (3-5 times/week)
milk_cheese_frequency
never
milk_substitute_frequency
yes
multivitamin
no
nail_biter
true
non_food_allergies_beestings
false
non_food_allergies_drug_eg_penicillin
false
non_food_allergies_pet_dander
false
non_food_allergies_poison_ivyoak
false
non_food_allergies_sun
false
non_food_allergies_unspecified
occasionally (1-2 times/week)
olive_oil
regularly (3-5 times/week)
one_liter_of_water_a_day_frequency
human gut metagenome
organism
no
other_supplement_frequency
no
pets_other
ucsdmi
physical_specimen_location
yes
physical_specimen_remaining
i do not have this condition
pku
never
plant_protein_frequency
never
pool_frequency
occasionally (1-2 times/week)
poultry_frequency
no
pregnant
occasionally (1-2 times/week)
prepared_meals_frequency
rarely (a few times/month)
probiotic_frequency
true
public
caucasian
race
never
ready_to_eat_meals_frequency
regularly (3-5 times/week)
red_meat_frequency
no
roommates_in_study
rarely (less than once/week)
salted_snacks_frequency
feces
sample_type
human gut metagenome
scientific_name
rarely (less than once/week)
seafood_frequency
yes
seasonal_allergies
male
sex
i do not have this condition
sibo
i do not have this condition
skin_condition
7-8 hours
sleep_duration
never
smoking_frequency
yes
softener
false
specialized_diet_exclude_dairy
false
specialized_diet_exclude_nightshades
false
specialized_diet_exclude_refined_sugars
false
specialized_diet_fodmap
false
specialized_diet_halaal
true
specialized_diet_i_do_not_eat_a_specialized_diet
false
specialized_diet_kosher
false
specialized_diet_modified_paleo_diet
false
specialized_diet_other_restrictions_not_described_here
false
specialized_diet_paleo_diet_or_primal_diet
false
specialized_diet_raw_food_diet
false
specialized_diet_unspecified
false
specialized_diet_weston_price_or_other_low_grain_low_processed_food_diet
never
sugar_sweetened_drink_frequency
occasionally (1-2 times/week)
sugary_sweets_frequency
regularly (3-5 times/week)
teethbrushing_frequency
i do not have this condition
thyroid
american gut project
title
10317.X00185562
title
no
tonsils_removed
6 to 10
types_of_plants
regularly (3-5 times/week)
vegetable_frequency
never
vitamin_b_supplement_frequency
never
vitamin_d_supplement_frequency
never
vivid_dreams
increased more than 10 pounds
weight_change
daily
whole_eggs
rarely (less than once/week)
whole_grain_frequency