ERC000011
ENA-CHECKLIST
2023-04-28T16:20:26Z
ENA-FIRST-PUBLIC
2023-04-28T16:20:26Z
ENA-LAST-UPDATE
SAMEA112990852
External Id
UCSDMI
INSDC center name
2023-04-28T16:20:26Z
INSDC first public
2023-04-28T16:20:26Z
INSDC last update
public
INSDC status
ERS14985875
SRA accession
qiita_sid_10317:10317.X00185796
Submitter Id
Diagnosed by a medical professional (doctor, physician assistant)
acid_reflux
No
acne_medication
No
acne_medication_otc
Diagnosed by a medical professional (doctor, physician assistant)
add_adhd
30s
age_cat
Yes
alcohol_consumption
Rarely (a few times/month)
alcohol_frequency
true
alcohol_types_beercider
false
alcohol_types_red_wine
false
alcohol_types_sour_beers
false
alcohol_types_spiritshard_alcohol
false
alcohol_types_unspecified
false
alcohol_types_white_wine
true
allergic_to_i_have_no_food_allergies_that_i_know_of
false
allergic_to_peanuts
false
allergic_to_shellfish
false
allergic_to_tree_nuts
false
allergic_to_unspecified
I do not have this condition
alzheimers
X00185796
anonymized_name
6 months
antibiotic_history
Yes
appendix_removed
Never
artificial_sweeteners
I do not have this condition
asd
Unspecified
autoimmune
Never
beet_frequency
1989
birth_year
Underweight
bmi_cat
One
bowel_movement_frequency
I tend to have diarrhea (watery stool) - Type 5, 6 and 7
bowel_movement_quality
No
breastmilk_formula_ensure
I do not have this condition
cancer
Unspecified
cancer_treatment
I do not have this condition
cardiovascular_disease
No
cat
Unspecified
cdiff
Yes
chickenpox
Unspecified
clinical_condition
1625738400000
collection_timestamp
No
consume_animal_products_abx
Unspecified
contraceptive
Never
cosmetics_frequency
Moldova, Republic of
country_of_birth
United States
country_residence
More than half the days
covid_anxious
false
covid_chronic_conditions_any_autoimmune_disease
false
covid_chronic_conditions_arthritis
true
covid_chronic_conditions_asthma_or_other_lung_problems
false
covid_chronic_conditions_atrial_fibrillation_or_atrial_flutter
false
covid_chronic_conditions_cancer
false
covid_chronic_conditions_chronic_obstructive_pulmonary_disease_copd
false
covid_chronic_conditions_congestive_heart_failure
false
covid_chronic_conditions_deep_vein_thrombosis
false
covid_chronic_conditions_diabetes_or_high_blood_sugar
false
covid_chronic_conditions_epilepsy_or_seizures
false
covid_chronic_conditions_frequent_or_very_bad_headaches
false
covid_chronic_conditions_heart_disease__myocardial_infarction
false
covid_chronic_conditions_heart_problems
false
covid_chronic_conditions_hiv
false
covid_chronic_conditions_hypertension
false
covid_chronic_conditions_immune_disorder
false
covid_chronic_conditions_kidney_problems
false
covid_chronic_conditions_pulmonary_embolism
false
covid_chronic_conditions_seasonal_allergies
false
covid_chronic_conditions_serious_acne_or_skin_problems
true
covid_chronic_conditions_serious_stomach_or_bowel_problems
false
covid_chronic_conditions_stroke
false
covid_chronic_conditions_unspecified
Nearly every day
covid_depressed
Very Severe
covid_difficulty_falling_asleep
false
covid_family_members_fallen_ill_physically
false
covid_family_members_hospitalized
false
covid_family_members_lost_job
true
covid_family_members_none_of_the_above
false
covid_family_members_passed_away
false
covid_family_members_put_into_self_quarantine_with_symptoms
false
covid_family_members_put_into_self_quarantine_without_symptoms_eg_due_to_possible_exposure
false
covid_family_members_reduced_ability_to_earn_money
false
covid_family_members_unspecified
false
covid_happened_to_you_fallen_ill_physically
false
covid_happened_to_you_hospitalized
true
covid_happened_to_you_lost_job
false
covid_happened_to_you_none_of_the_above
false
covid_happened_to_you_put_into_self_quarantine_with_symptoms
false
covid_happened_to_you_put_into_self_quarantine_without_symptoms_eg_due_to_possible_exposure
true
covid_happened_to_you_reduced_ability_to_earn_money
false
covid_happened_to_you_unspecified
Nearly every day
covid_interest_pleasure
1-2 days per week
covid_left_home
Very poor
covid_level_of_wellbeing
true
covid_likely_exposure_no
false
covid_likely_exposure_unspecified
false
covid_likely_exposure_yes_someone_with_medical_diagnosis_but_no_test
false
covid_likely_exposure_yes_someone_with_positive_test
false
covid_likely_exposure_yes_someone_with_possible_symptoms_but_no_diagnosis_by_doctor
No
covid_patient_care
Unspecified
covid_patient_care_seven_days
Unspecified
covid_patient_care_seven_days_confirmed
Somewhat noticeable
covid_quality_of_life
No
covid_rideshare
Quite interfering
covid_sleep_interference
Very dissatisfied
covid_sleep_pattern
No symptoms or signs
covid_suspected_positive
false
covid_symptoms_chest_pain_or_tightness_in_chest
false
covid_symptoms_cough
false
covid_symptoms_diarrhea
false
covid_symptoms_fatigue
false
covid_symptoms_fever
false
covid_symptoms_lack_of_appetitie
false
covid_symptoms_loss_of_taste_or_smell
false
covid_symptoms_nausea
false
covid_symptoms_shortness_of_breath
false
covid_symptoms_sore_throat
Yes
covid_symptoms_stay_home
false
covid_symptoms_unspecified
Severe
covid_waking_up_early
Quite worried
covid_worried_sleep
More than half the days
covid_worrying
No
csection
I use deodorant
deodorant_use
American Gut Project Stool sample
description
Unspecified
diabetes
Unspecified
diabetes_type
Unspecified
diet_type
TRUE
dna_extracted
Yes
dog
I am right handed
dominant_hand
Filtered
drinking_water_source
1-2
drinks_per_session
Host-associated
empo_1
Animal
empo_2
Animal distal gut
empo_3
dense settlement biome
env_biome
human-associated habitat
env_feature
feces
env_material
human-gut
env_package
I do not have this condition
epilepsy_or_seizure_disorder
Rarely (a few times/month)
exercise_frequency
Outdoors
exercise_location
Not sure
fed_as_infant
Never
fermented_plant_frequency
Daily
flossing_frequency
Year
flu_vaccine_date
Never
frozen_dessert_frequency
Never
fruit_frequency
Unspecified
fungal_overgrowth
I do not eat gluten because it makes me feel bad
gluten
Never
high_fat_red_meat_frequency
Daily
homecooked_meals_frequency
31.9
host_age
31.9
host_age_normalized_years
UBERON:feces
host_body_habitat
17.2
host_body_mass_index
UBERON:feces
host_body_product
UBERON:feces
host_body_site
human
host_common_name
177.8
host_height
cm
host_height_units
['abdcedf7688a355fbba630fdde603df98975510e42b0c44324c46c0a319676b0d6bf70e615867392c7d250c6a77f2920949c90b173d6e61000a4fd6b4eafd8e6']
host_subject_id
9606
host_taxid
54.431149132276765
host_weight
kg
host_weight_units
Unspecified
ibd
Unspecified
ibd_diagnosis_refined
Diagnosed by a medical professional (doctor, physician assistant)
ibs
Unspecified
kidney_disease
Unspecified
lactose
I have lived in my current state of residence for more than a year.
last_move
1 year
last_travel
Graduate or Professional degree
level_of_education
Adult
lifestage
Diagnosed by a medical professional (doctor, physician assistant)
liver_disease
No
livingwith
Diagnosed by a medical professional (doctor, physician assistant)
lung_disease
Regularly (3-5 times/week)
meat_eggs_frequency
Yes
mental_illness
false
mental_illness_type_anorexia_nervosa
false
mental_illness_type_bipolar_disorder
false
mental_illness_type_bulimia_nervosa
true
mental_illness_type_depression
false
mental_illness_type_ptsd_post_traumatic_stress_disorder
false
mental_illness_type_schizophrenia
false
mental_illness_type_substance_abuse
false
mental_illness_type_unspecified
Self-diagnosed
migraine
Never
milk_cheese_frequency
Never
milk_substitute_frequency
No
multivitamin
Yes
nail_biter
false
non_food_allergies_beestings
false
non_food_allergies_drug_eg_penicillin
false
non_food_allergies_pet_dander
false
non_food_allergies_poison_ivyoak
false
non_food_allergies_sun
false
non_food_allergies_unspecified
Never
olive_oil
Regularly (3-5 times/week)
one_liter_of_water_a_day_frequency
human gut metagenome
organism
No
other_supplement_frequency
No
pets_other
UCSDMI
physical_specimen_location
Yes
physical_specimen_remaining
I do not have this condition
pku
Never
plant_protein_frequency
Never
pool_frequency
Occasionally (1-2 times/week)
poultry_frequency
No
pregnant
Never
prepared_meals_frequency
Never
probiotic_frequency
TRUE
public
Caucasian
race
Never
ready_to_eat_meals_frequency
Never
red_meat_frequency
No
roommates_in_study
Never
salted_snacks_frequency
Stool
sample_type
human gut metagenome
scientific_name
Never
seafood_frequency
No
seasonal_allergies
male
sex
Diagnosed by an alternative medicine practitioner
sibo
Diagnosed by a medical professional (doctor, physician assistant)
skin_condition
6-7 hours
sleep_duration
Never
smoking_frequency
No
softener
true
specialized_diet_exclude_dairy
false
specialized_diet_exclude_nightshades
true
specialized_diet_exclude_refined_sugars
true
specialized_diet_fodmap
false
specialized_diet_halaal
false
specialized_diet_i_do_not_eat_a_specialized_diet
false
specialized_diet_kosher
false
specialized_diet_modified_paleo_diet
true
specialized_diet_other_restrictions_not_described_here
false
specialized_diet_paleo_diet_or_primal_diet
false
specialized_diet_raw_food_diet
false
specialized_diet_unspecified
true
specialized_diet_weston_price_or_other_low_grain_low_processed_food_diet
Never
sugar_sweetened_drink_frequency
Never
sugary_sweets_frequency
Rarely (a few times/month)
teethbrushing_frequency
Unspecified
thyroid
10317.X00185796
title
American Gut Project
title
Yes
tonsils_removed
Less than 5
types_of_plants
Never
vegetable_frequency
Never
vitamin_b_supplement_frequency
Never
vitamin_d_supplement_frequency
Occasionally (1-2 times/week)
vivid_dreams
Decreased more than 10 pounds
weight_change
Never
whole_eggs
Never
whole_grain_frequency