ERC000047
ENA-CHECKLIST
2023-05-01T00:19:34Z
ENA-FIRST-PUBLIC
2023-05-01T00:19:34Z
ENA-LAST-UPDATE
SAMEA112743524
External Id
MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC center name
2023-05-01T00:19:34Z
INSDC first public
2023-05-01T00:19:34Z
INSDC last update
public
INSDC status
ERS14738786
SRA accession
FRAM_WSC20_S10_BML_bin_46_1
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
Flye v2.9.1
assembly software
Default settings
binning parameters
Metabat2 v2.15
binning software
marine pelagic biome [ENVO:01000023]
broad-scale environmental context
2020-09-17
collection date
91.11
%
completeness score
CheckM v1.2.0
completeness software
0.74
%
contamination score
Manually refined metagenome-assembled genome derived from a water column sample collected in the Fram Strait/West Spitsbergen region, specifically derived from ERS14356888,ERR10946522
description
sea water [ENVO:00002149]
environmental medium
Svalbard
geographic location (country and/or sea)
78.455829
DD
geographic location (latitude)
10.256424
DD
geographic location (longitude)
seawater
isolation_source
marine photic zone [ENVO:00000209]
local environmental context
marine metagenome
metagenomic source
uncultured Pseudomonadales bacterium
organism
FRAM_WSC20 metagenomes
project name
ERS14356888,ERR10946522
sample derived from
uncultured Pseudomonadales bacterium
scientific_name
16S rRNA gene and multi-gene marker approach
taxonomic identity marker
Fram Strait/West Spitsbergen Shelf water column MAG - FRAM_WSC20_S10_BML_bin_46_1
title