ERC000020
ENA-CHECKLIST
2024-02-26T16:08:25Z
ENA-FIRST-PUBLIC
2024-02-26T16:08:25Z
ENA-LAST-UPDATE
SAMEA114790126
External Id
TUBS-IPB
INSDC center name
2024-02-26T16:08:25Z
INSDC first public
2024-02-26T16:08:25Z
INSDC last update
public
INSDC status
ERS17211772
SRA accession
V9_5_BS_5
Submitter Id
controlled environment (climate chamber)
broad-scale environmental context
2020
collection date
Set C Bulk Soil replicate 5
description
soil (artificial substrate mixture of potting compost, sand, vermiculite, fertilizer)
environmental medium
Germany
geographic location (country and/or sea)
52
DD
geographic location (latitude)
10
DD
geographic location (longitude)
mesocosm pot experiment
local environmental context
GATCAG,ATGAGC
multiplex identifiers
Fast DNA SpinKit for Soil, MP Biomedicals, Germany
nucleic acid extraction
soil metagenome
organism
CCTAYGGGRBGCASCAG,GGACTACNNGGGTATCTAAT
pcr primers
Amplicon sequencing of 16S rRNA gene fragments of Arabidopsis Rhizosphere
project name
homogenizing substrate mixture by stirring, sampling approximately 1.5 g
sample collection method
soil metagenome
scientific_name
Illumina NovaSeq 6000
sequencing method
16S rRNA
target gene
V3-V4 on 16S rRNA
target subfragment
SetC_BS_5
title