Yes
16S recovered
PROKKA (version 1.14.5)
16S recovery software
ERC000050
ENA-CHECKLIST
2023-11-28T11:58:08Z
ENA-FIRST-PUBLIC
2023-11-28T11:58:08Z
ENA-LAST-UPDATE
SAMEA114757768
External Id
Nova Southeastern University
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
2023-11-28T11:58:08Z
INSDC first public
2023-11-28T11:58:08Z
INSDC last update
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS17177456
SRA accession
d33dd8e9-7a0c-47f3-905f-434790b991f2
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG
assembly software
coverage; graph
binning parameters
MetaBat (version 2.15-15-gd6ea400); DASTOOL (version 1.1.5)
binning software
aquatic biome
broad-scale environmental context
XAVIER BAILLY
collected by
Station Biologique de Roscoff / CNRS / France
collecting institution
2020-12-20
collection date
64.07
%
completeness score
checkM (version 1.2.1); checkM_DB (release 2015-01-16)
completeness software
0.03
%
contamination score
adult xenacoelomorph tissue
environmental medium
France
geographic location (country and/or sea)
48.68
DD
geographic location (latitude)
3.93
DD
geographic location (longitude)
Brittany | Callot Island | Carantec (town)
geographic location (region and locality)
interdital marine environment
habitat
adult
host life stage
Symsagittifera roscoffensis
host scientific name
hermaphrodite
host sex
84072
host taxid
XAVIER BAILLY
identified by
Station Biologique de Roscoff / CNRS / France
identifier_affiliation
metagenome-assembled genome
investigation type
Xenacoelomorph: Symsagittifera roscoffensis
isolation_source
marine biome
local environmental context
invertebrate metagenome
metagenomic source
108
number of standard tRNAs extracted
Vibrio splendidus
organism
WHOLE ORGANISM
organism part
ASG
project name
SAMEA114757766
sample derived from
Vibrio splendidus
scientific_name
Pacbio Sequel II
sequencing method
NSU0042505
specimen id
NOT COLLECTED
specimen voucher
PROKKA (version 1.14.5)
tRNA extraction software
GTDB-TK (version 2.3.2); GTDB (release 214)
taxonomic classification
ani_screen
taxonomic identity marker
d33dd8e9-7a0c-47f3-905f-434790b991f2-asg-bin.182
title
txSymRosc5.Vibrio_splendidus_1
tolid