Yes
16S recovered
PROKKA (version 1.14.5)
16S recovery software
ERC000047
ENA-CHECKLIST
2023-11-30T10:59:35Z
ENA-FIRST-PUBLIC
2023-11-30T10:59:35Z
ENA-LAST-UPDATE
SAMEA114772237
External Id
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
2023-11-30T10:59:35Z
INSDC first public
2023-11-30T10:59:35Z
INSDC last update
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS17192984
SRA accession
74659f5b-076d-405d-85b9-d04921e2222e
Submitter Id
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly quality
metaMDBG
assembly software
coverage; graph; hic-mapping
binning parameters
MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR
binning software
aquatic biome
broad-scale environmental context
KATHRIN BUSCH
collected by
GEOMAR
collecting institution
2017-06-24
collection date
88.31
%
completeness score
checkM (version 1.2.1); checkM_DB (release 2015-01-16)
completeness software
0
%
contamination score
1018
m
depth
adult sponge tissue
environmental medium
Spain
geographic location (country and/or sea)
43.78
DD
geographic location (latitude)
-6.20
DD
geographic location (longitude)
Cantabrian_Sea_Avilés_Canyon
geographic location (region and locality)
canyon
habitat
adult
host life stage
Aphrocallistes beatrix
host scientific name
398365
host taxid
PILAR RÌOS
identified by
IEO, Spain
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Aphrocallistes beatrix
isolation_source
marine benthic biome
local environmental context
sponge metagenome
metagenomic source
47
number of standard tRNAs extracted
Gammaproteobacteria bacterium
organism
WHOLE ORGANISM
organism part
ASG
project name
SAMEA114772234
sample derived from
Gammaproteobacteria bacterium
scientific_name
Pacbio Sequel II
sequencing method
GHC0000028
specimen id
NOT PROVIDED
specimen voucher
PROKKA (version 1.14.5)
tRNA extraction software
GTDB-TK (version 2.1.1); GTDB (release 207_v2)
taxonomic classification
taxonomic classification defined by topology and ANI
taxonomic identity marker
74659f5b-076d-405d-85b9-d04921e2222e-asg-MAGScoT_cleanbin_000001
title
ohAphBeat7.Gammaproteobacteria_1
tolid