ERC000011
ENA-CHECKLIST
2023-11-29T05:06:25Z
ENA-FIRST-PUBLIC
2023-11-29T05:06:25Z
ENA-LAST-UPDATE
SAMEA114765759
External Id
Okinawa Institute of Science and Technology Graduate University (OIST)
INSDC center name
2023-11-29T05:06:25Z
INSDC first public
2023-11-29T05:06:25Z
INSDC last update
public
INSDC status
ERS17185519
SRA accession
OikoHiC_1_77
Submitter Id
Alfonso Ferrández-Roldán
collected_by
2021-12-21
collection date
Long-range Hi-C data generated from DNA extracted from sperm from 77 males following the Omni-C kit (Dovetail) protocol. The animals were collected from the on-doing laboratory culture deriving from the wild population in Barcelona, Spain. The Hi-C library was sequenced on a Illumina platform in CNAG using a HiC aplication with multiple index 80UDI-idt-UMI in the sequencing kit.
description
Mature males
dev_stage
Mediterranean Sea
geographic location (country and/or sea)
Pont del petroli, Badalona, Barcelona, Catalonia, Spain (41.440329385104306, 2.248974268048978)
geographic location (region and locality)
Laboratory strain cultivated at the C. Cañestro laboratory, Barcelona University, descendants from wild animals collected in March 2017
isolation_source
Oikopleura dioica
organism
Oikopleura dioica
scientific_name
Hi-C data from the Barcelona laboratory strain of Oikopleura dioica
title