2024-03-05
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS18351793
SRA accession
ERR7163067_metabat2_27
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.3
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
aquatic
broad-scale environmental context
EBI-EMG
broker name
2015-02-23
collection date
79.56
%
completeness score
EukCC_v2.1.0
completeness software
3.31
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run ERR7163067 of study ERP132647.
description
aquaculture
environmental medium
South Korea
geographic location (country and/or sea)
34.40783333
DD
geographic location (latitude)
126.34497222
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
aquaculture metagenome
isolation_source
marine
local environmental context
aquaculture metagenome
metagenomic source
uncultured Cafeteriaceae
organism
whole metagenomic sequencing for marine aquaculture microbiomes collected from Jindo, Tongyeong, and Wando, Korea
project name
SAMEA10031318
sample derived from
uncultured Cafeteriaceae
scientific_name
Illumina HiSeq 4000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: ERR7163067_metabat2_27
title