2024-03-07
ENA first public
ERC000050
ENA-CHECKLIST
The Globe Institute
INSDC center name
public
INSDC status
ERS18406455
SRA accession
M33_bin1
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
SPAdes
assembly software
default
binning parameters
metaBAT
binning software
Agricultural ecosystem
broad-scale environmental context
2020
collection date
99.08
%
completeness score
CheckM
completeness software
0
%
contamination score
Binned metagenome assembly
description
Nesting material|Honey
environmental medium
Denmark
geographic location (country and/or sea)
55.505979
DD
geographic location (latitude)
8.915118
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
sample from beehive with signs of AFB
isolation_source
Apiary
local environmental context
bee metagenome
metagenomic source
Paenibacillus larvae
organism
ArcHives
project name
ERS17747803
sample derived from
Paenibacillus larvae
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
Bin 1 from sample M33
title