2024-03-25
ENA first public
ERC000011
ENA-CHECKLIST
UCSDMI
INSDC center name
public
INSDC status
ERS18423421
SRA accession
qiita_sid_14677:14677.305.pretumor
Submitter Id
305.pretumor
anonymized_name
2021-05-25
birth_date
563689
cage_card_id
murine_gastric_cancer
cancer_type
2021-08-03
collection date
2021-08-03
collection_timestamp
Puerto Rico
country
Fecal pellets collected from C57/BL6 mice over three collection timepoints to understand the gut microbiome in relation to viroimmunotherapy efficacy.
description
TRUE
dna_extracted
13
elevation
Host-associated
empo_1
Host-associated (non-saline)
empo_2
Animal (non-saline)
empo_3
Animal distal gut (non-saline)
empo_4
urban biome
env_biome
research facility
env_feature
fecal material
env_material
host-associated
env_package
4
expt_n
M12Luc_SSH
expt_name
Puerto Rico
geo_loc_name
Puerto Rico
geographic location (country and/or sea)
Mus musculus
host scientific name
71
host_age
days
host_age_units
UBERON:feces
host_body_habitat
not applicable
host_body_mass_index
UBERON:feces
host_body_product
UBERON:feces
host_body_site
mouse
host_common_name
juvenile
host_life_stage
305
host_subject_id
10090
host_taxid
not applicable
host_weight
g
host_weight_units
29.706854
latitude
-95.397066
longitude
8/4/21
m12luc_implant_date
305
mouse_id
C57_BL6
mouse_strain
mouse gut metagenome
organism
Microbial Ecology and Genomics Lab RCM San Juan PR
physical_specimen_location
TRUE
physical_specimen_remaining
feces
qiita_sample_type
1_Naive
response_mice
2021-08-25
rgdoxdh_or_pbs_injection_1
2021-08-27
rgdoxdh_or_pbs_injection_2
2021-08-30
rgdoxdh_or_pbs_injection_3
2021-09-01
rgdoxdh_or_pbs_injection_4
2021-09-03
rgdoxdh_or_pbs_injection_5
PBS305
sample_tube_id
feces
sample_type
mouse gut metagenome
scientific_name
male
sex
first_timepoint_fecal_pellet_before_cells_injected
timepoint
1_Before_Tumor_Naive
timepoint_treatment_group
COMBINATION_OF_VIROIMMUNOTHERAPY_AND_MICROBIOTA_MODULATION_TO_TREAT_GASTRIC_CANCER
title
14677.305.pretumor
title
PBS
treatment_group
PBS305
tube_id
14.278
tumor_growth_rate_mm3_day
229.4
tumor_volume_mm3_after_rgdoxdh_treatment_2021_09_07