PROKKA (version 1.14.5)
16S recovery software
Yes
16s recovered
2024-03-29
ENA first public
ERC000047
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS18629793
SRA accession
d9931a99-d968-425b-8f46-6ba07adf8f38
Submitter Id
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly quality
metaMDBG
assembly software
coverage; graph; hic-mapping
binning parameters
MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7)
binning software
aquatic biome
broad-scale environmental context
NICOLE WEBSTER
collected_by
AIMS
collecting institution
2020-09-23
collection date
94.29
%
completeness score
checkM (version 1.2.1); checkM_DB (release 2015-01-16)
completeness software
0.61
%
contamination score
12.0
m
depth
adult sponge tissue
environmental medium
Australia
geographic location (country and/or sea)
18.91
DD
geographic location (latitude)
147.70
DD
geographic location (longitude)
Queensland | Great Barrier Reef | Davies Reef
geographic location (region and locality)
Reef
habitat
adult
host life stage
Carteriospongia foliascens
host scientific name
not collected
host sex
593584
host taxid
NICOLE WEBSTER
identified_by
AIMS
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Carteriospongia foliascens
isolation_source
marine reef biome
local environmental context
sponge metagenome
metagenomic source
45
number of standard tRNAs extracted
Arenicellales bacterium
organism
WHOLE ORGANISM
organism part
ASG
project name
SAMEA115457859
sample derived from
Arenicellales bacterium
scientific_name
Pacbio Sequel II
sequencing method
GHC0000113
specimen_id
NOT PROVIDED
specimen_voucher
PROKKA (version 1.14.5)
tRNA extraction software
GTDB-TK (version 2.3.2); GTDB (release 214)
taxonomic classification
taxonomic novelty determined using RED
taxonomic identity marker
d9931a99-d968-425b-8f46-6ba07adf8f38-asg-MAGScoT_cleanbin_000017
title
odCarFoli1.Arenicellales_1
tolid