2024-03-30
ENA first public
ERC000047
ENA-CHECKLIST
Computational Biology and Microbial Ecology
INSDC center name
public
INSDC status
ERS18230359
SRA accession
MAG_0_R8
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
MEGAHIT; 1.2.9; default parameters
assembly software
default parameters
binning parameters
MaxBin (biotools:maxbin), Concoct, MetaBAT2, DAS Tool
binning software
mangrove biome soil
broad-scale environmental context
2021-06
collection date
99.73
%
completeness score
CheckM
completeness software
1.84
%
contamination score
This sample represents a MAG derived from the metagenomic sample ERR12658427
description
estuarine mud
environmental medium
Colombia
geographic location (country and/or sea)
10,26366
DD
geographic location (latitude)
-75,59169
DD
geographic location (longitude)
mangrove soil microbiome under the presence of seawater collected from Baru Island (Colombia)
isolation_source
hotel
local environmental context
mangrove metagenome
metagenomic source
Brevibacillus agri
organism
Hunting polymers-transforming microbes from mangrove soils
project name
ERS18220289
sample derived from
Brevibacillus agri
scientific_name
multi-marker approach
taxonomic identity marker
MAG_0_R8
title