PROKKA (version 1.14.5)
16S recovery software
Yes
16s recovered
2024-03-29
ENA first public
ERC000047
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS18629846
SRA accession
904e1796-c903-44e7-be22-02f27e99a007
Submitter Id
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly quality
metaMDBG
assembly software
coverage; graph; hic-mapping
binning parameters
MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR
binning software
aquatic biome
broad-scale environmental context
SALLY LEYS
collected_by
University of Alberta
collecting institution
2020-12-14
collection date
boot sponge
common name
76.85
%
completeness score
checkM (version 1.2.1); checkM_DB (release 2015-01-16)
completeness software
0.0
%
contamination score
29.0
m
depth
adult sponge tissue
environmental medium
Canada
geographic location (country and/or sea)
49.30
DD
geographic location (latitude)
-124.17
DD
geographic location (longitude)
Edmonton | University of Alberta
geographic location (region and locality)
marine, coldwater, rock wall
habitat
adult
host life stage
Acanthascus dawsoni
host scientific name
not collected
host sex
472225
host taxid
SALLY LEYS
identified_by
University of Alberta
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Acanthascus dawsoni
isolation_source
marine benthic biome
local environmental context
sponge metagenome
metagenomic source
42
number of standard tRNAs extracted
Candidatus Paceibacterota bacterium
organism
WHOLE ORGANISM
organism part
ASG
project name
SAMEA115457903
sample derived from
Candidatus Paceibacterota bacterium
scientific_name
Pacbio Sequel II
sequencing method
GHC0000128
specimen_id
RD-OLP 01
specimen_voucher
PROKKA (version 1.14.5)
tRNA extraction software
GTDB-TK (version 2.3.2); GTDB (release 214)
taxonomic classification
taxonomic novelty determined using RED
taxonomic identity marker
904e1796-c903-44e7-be22-02f27e99a007-asg-MAGScoT_cleanbin_000019
title
ohAcaDaws1.Paceibacterota_1
tolid