2024-04-01
ENA first public
ERC000011
ENA-CHECKLIST
SAMEA114857190
External Id
Newcastle University Wellcome Sanger Institute
INSDC center name
2023-12-07T21:16:27Z
INSDC last update
public
INSDC status
ERS17282149
SRA accession
E-MTAB-13614:CTCL3
Submitter Id
74
year
age
ArrayExpress
broker name
not collected
collection date
human
common name
Protocols: Samples were collected as 6mm biopsies from patients who have CTCL. Each biopsy was then cut in half and one half was fixed in formalin and then paraffin embedded. Sections of tissue were cut using a microtome and mounted onto a slide. The 10x FFPE CytAssist Spatial Transcriptomics protocol was then used to hybridise probed to the RNA and spatially barcode the transcripts. The 10x FFPE Spatial Gene Expression library preparation protocol was used to prepare sequencing-ready libraries.
description
adult
developmental stage
Cutaneous T-cell lymphoma
disease
not collected
geographic location (country and/or sea)
not applicable
isolate
Homo sapiens
organism
Homo sapiens
organism
skin of body
organism part
3
replicate
Homo sapiens
scientific_name
female
sex
CTCL3
title