2024-04-04
ENA first public
ERC000047
ENA-CHECKLIST
SAMEA115172034
External Id
EMG
INSDC center name
2024-02-01T16:07:07Z
INSDC last update
public
INSDC status
ERS18089099
SRA accession
ERR7163068_binner123_64
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.3
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
aquatic
broad-scale environmental context
EBI-EMG
broker name
2015-02-23
collection date
common name
95.4
%
completeness score
CheckM2_v1.0.1
completeness software
0.32
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run ERR7163068 of study ERP132647.
description
aquaculture
environmental medium
South Korea
geographic location (country and/or sea)
34.42352777
DD
geographic location (latitude)
126.3493611
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
aquaculture metagenome
isolation_source
marine
local environmental context
aquaculture metagenome
metagenomic source
uncultured Candidatus Gracilibacteria bacterium
organism
Illumina HiSeq 4000 paired end sequencing
project name
SAMEA10031319
sample derived from
uncultured Candidatus Gracilibacteria bacterium
scientific_name
Illumina HiSeq 4000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: ERR7163068_binner123_64
title