2024-04-04
ENA first public
ERC000047
ENA-CHECKLIST
SAMEA115172021
External Id
EMG
INSDC center name
2024-02-01T16:07:07Z
INSDC last update
public
INSDC status
ERS18089085
SRA accession
ERR7163067_binner12_101
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.3
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
aquatic
broad-scale environmental context
EBI-EMG
broker name
2015-02-23
collection date
common name
99.71
%
completeness score
CheckM2_v1.0.1
completeness software
0.04
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run ERR7163067 of study ERP132647.
description
aquaculture
environmental medium
South Korea
geographic location (country and/or sea)
34.40783333
DD
geographic location (latitude)
126.3449722
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
aquaculture metagenome
isolation_source
marine
local environmental context
aquaculture metagenome
metagenomic source
Lentibacter algarum
organism
Illumina HiSeq 4000 paired end sequencing
project name
SAMEA10031318
sample derived from
Lentibacter algarum
scientific_name
Illumina HiSeq 4000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: ERR7163067_binner12_101
title