2024-04-04
ENA first public
ERC000047
ENA-CHECKLIST
SAMEA115172087
External Id
EMG
INSDC center name
2024-02-01T16:07:08Z
INSDC last update
public
INSDC status
ERS18089154
SRA accession
ERR7163073_concoct_47
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.3
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
aquatic
broad-scale environmental context
EBI-EMG
broker name
2017-11-16
collection date
common name
91.43
%
completeness score
CheckM2_v1.0.1
completeness software
3.2
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run ERR7163073 of study ERP132647.
description
aquaculture
environmental medium
South Korea
geographic location (country and/or sea)
34.53379444
DD
geographic location (latitude)
127.1113805
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
aquaculture metagenome
isolation_source
marine
local environmental context
aquaculture metagenome
metagenomic source
uncultured Candidatus Actinomarinales bacterium
organism
Illumina HiSeq 4000 paired end sequencing
project name
SAMEA10031324
sample derived from
uncultured Candidatus Actinomarinales bacterium
scientific_name
Illumina HiSeq 4000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: ERR7163073_concoct_47
title