SAMN31888478
External Id
Xiangya Hospital, Central South University
INSDC center name
2022-11-28T00:00:00Z
INSDC first public
2022-11-28T06:17:19.360Z
INSDC last update
SRS15879575
INSDC secondary accession
live
INSDC status
Metagenome or environmental
NCBI submission model
Metagenome.environmental.1.0
NCBI submission package
SRS15879575
SRA accession
2022-06-06
collection_date
Cutaneous granulomatosis is a kind of inflammatory reaction caused by various triggers including infections, foreign bodies, malignancies, chemicals, and so on. They can be divided into non-infectious and infectious granulomas due to different pathogenic factors. Here we report a child who presented with multiple invasive skin plaques accompanied by ulceration. Biopsies were performed successively and found tuberculous granuloma several times around. But no pathogen was found by special staining, tissue culture, or RT-PCR detection. Diagnostic quadrupled anti-mycobacterium therapy was also ineffective. Then NGS made a crucial discovery, rubella virus was founded and sequenced.
description
China:changsha
geo_loc_name
Homo sapiens
host
changsha
isolation_source
27.51 N 111.53 E
lat_lon
human metagenome
http://purl.obolibrary.org/obo/NCBITaxon_646099
organism
Metagenome or environmental sample from human metagenome
title