Ike-200m-22
2024-05-02
ENA first public
ERC000047
ENA-CHECKLIST
SAMEA14306377
External Id
BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO
INSDC center name
2022-05-02T20:59:52Z
INSDC last update
public
INSDC status
ERS11897694
SRA accession
Ike-200m-22
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
MEGAHIT; kmer set 29,49,69,89,109,119,129,149
assembly software
coverage and kmer
binning parameters
MetaBAT2
binning software
2017-11-25
collection date
61.69
%
completeness score
checkm
completeness software
0.99
%
contamination score
Patescibacteria assembled from Lake Ikeda
description
freshwater lake
environment (biome)
lake
environment (feature)
fresh water
environment (material)
Japan
geographic location (country and/or sea)
31.233333
DD
geographic location (latitude)
130.566667
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
Freshwater lake
isolation_source
freshwater metagenome
metagenomic source
Patescibacteria group bacterium
organism
PRJEB35640
project name
ERS6344566
sample derived from
Patescibacteria group bacterium
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker