RH-27jun17-134
2024-05-02
ENA first public
ERC000047
ENA-CHECKLIST
SAMEA14306495
External Id
BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO
INSDC center name
2022-05-02T20:59:53Z
INSDC last update
public
INSDC status
ERS11897812
SRA accession
RH-27jun17-134
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
MEGAHIT; kmer set 29,49,69,89,109,119,129,149
assembly software
coverage and kmer
binning parameters
MetaBAT2
binning software
2017-06-27
collection date
52.78
%
completeness score
checkm
completeness software
0
%
contamination score
Patescibacteria assembled from Rimov Reservoir
description
freshwater lake
environment (biome)
reservoir
environment (feature)
fresh water
environment (material)
Czech Republic
geographic location (country and/or sea)
48.846361
DD
geographic location (latitude)
14.487639
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
Freshwater lake
isolation_source
freshwater metagenome
metagenomic source
uncultured Candidatus Saccharimonas sp.
organism
PRJEB35770
project name
ERS4146242
sample derived from
uncultured Candidatus Saccharimonas sp.
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker