2024-05-11
ENA first public
ERC000013
ENA-CHECKLIST
SAMEA14374096
External Id
Earth Hologenome Iniatiative
INSDC center name
2022-05-11T06:09:32Z
INSDC last update
public
INSDC status
ERS11968302
SRA accession
ena-upload-cli
SUBMISSION_TOOL
0.5.3
SUBMISSION_TOOL_VERSION
AAV39
Submitter Id
AGATCGGAAGAGCACACGTCTGAACTCCAGTCA AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT
adapters
2020-12-22
collection date
Animal-derived sample for hologenomic analyses
description
1000221 - Temperate woodland
environment (biome)
parklike habitat
environment (feature)
animal
environment (material)
Italy
geographic location (country and/or sea)
44.84
DD
geographic location (latitude)
7.77
DD
geographic location (longitude)
Anal/cloacal swab
host body product
Eastern grey squirrel
host common name
male
host sex
SD00421
host subject id
30640
host taxid
565.0
g
host total mass
host-associated
host-associated environmental package
metagenome
investigation type
feces metagenome
organism
Sciurus carolinensis
project name
SAMEA14327537
sample derived from
EHI laboratory University of Copenhagen
sample storage location
-20
°C
sample storage temperature
feces metagenome
scientific_name
Illumina NovaSeq 6000 S4 150PE
sequencing method
AAV39
title