2024-03-12
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS18422436
SRA accession
SRR5788434_binner23_Refined_10
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.3
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
water
broad-scale environmental context
EBI-EMG
broker name
2010-05-20
collection date
84.99
%
completeness score
CheckM2_v1.0.1
completeness software
0.21
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR5788434 of study SRP110813.
description
ocean
environmental medium
Atlantic Ocean
geographic location (country and/or sea)
36.20670000
DD
geographic location (latitude)
-53.26810000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
marine metagenome
isolation_source
marine
local environmental context
marine metagenome
metagenomic source
uncultured Candidatus Poseidoniales archaeon
organism
Marine metagenomes from the bioGEOTRACES project Metagenome
project name
SAMN07136495
sample derived from
uncultured Candidatus Poseidoniales archaeon
scientific_name
NextSeq 550
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR5788434_binner23_Refined_10
title