2024-04-20
ENA first public
ERC000050
ENA-CHECKLIST
Department of Plant and Microbial Biology
INSDC center name
public
INSDC status
ERS18420392
SRA accession
cycles.exp.s176
Submitter Id
metaSPAdes v3.13.1
assembly software
coverage
binning parameters
MetaBAT2
binning software
freshwater biome
broad-scale environmental context
2019-11-07
collection date
36.21
%
completeness score
CheckM v1.2.2
completeness software
1.72
%
contamination score
C7.microcosm.18.Pseudomonas azotoformans
description
fresh water
environmental medium
Switzerland
geographic location (country and/or sea)
47.2903783
DD
geographic location (latitude)
8.5965403
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
lake microbial community
isolation_source
freshwater lake biome
local environmental context
lake water metagenome
metagenomic source
Pseudomonas azotoformans
organism
PRJEB73309
project name
ERS18355678
sample derived from
Pseudomonas azotoformans
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
lake microbial community
title