2024-06-02
ENA first public
ERC000033
ENA-CHECKLIST
SAMEA14501197
External Id
EPI_ISL_13069002
GISAID Accession ID
VEO Monkeypox analysis group
INSDC center name
2022-06-21T14:24:14Z
INSDC last update
public
INSDC status
ERS12132173
SRA accession
run_665
Submitter Id
ERASMUS MC, UNIVERISTY MEDICAL CENTER
broker name
VEO Monekypox analysis group
collecting institution
2022-05
collection date
VEO Monekypox analysis group
collector name
Nanopore sequencing was performed on clinical material after DNAse treatment. In short, DNA was extracted using Ampure Beads after which an end repair step was performed (Ultra II End-prep EBNext). Adapters were ligated, Ampure bead washes were performed twice and a random PCR was performed (following the SQK-PBK004 protocol from Nanopore)
description
Netherlands
geographic location (country and/or sea)
monkeypox
host common name
not collected
host health state
Homo sapiens
host scientific name
not collected
host sex
restricted access
host subject id
hMpxV/Netherlands/EMC_NA_NL002/2022
isolate
Monkeypox virus
organism
Monkeypox virus
scientific_name
Monkeypox whole-genome sequencing from Netherlands 2022
title