2024-06-13
ENA first public
ERC000047
ENA-CHECKLIST
SAMEA110104321
External Id
Spribille Lab
INSDC center name
2022-06-13T20:45:31Z
INSDC last update
public
INSDC status
ERS12202298
SRA accession
TF41_63
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes;3.15.1;kmer set 21,31,51,71,81,101,127, default parameters otherwise
assembly software
coverage and kmer frequencies
binning parameters
CONCOCT 1.1.0
binning software
2021-07-22
collection date
99.62
%
completeness score
eukcc2 2.1.0
completeness software
0.38
%
contamination score
This sample represents a MAG derived from the metagenomic sample ERS12168530
description
deciduous woodland
environment (biome)
forest understory
environment (feature)
fallen Quercus rubra branch
environment (material)
USA
geographic location (country and/or sea)
41.907768
DD
geographic location (latitude)
-91.502704
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
Degraded sporocarp of Tremella fuciformis
isolation_source
fungus metagenome
metagenomic source
Sporothrix epigloea
organism
PRJEB53444
project name
ERS12168530
sample derived from
Sporothrix epigloea
scientific_name
pyrosequencing
sequencing method
multi-marker approach
taxonomic identity marker
Sporothrix epigloea MAG derived from the metagenomic sample ERS12168530
title