2024-07-04
ENA first public
ERC000047
ENA-CHECKLIST
KOPRI
INSDC center name
public
INSDC status
ERS20443894
SRA accession
10C-St8-MC-01_bin.21.strict
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
MEGAHIT (v1.2.9)
assembly software
completeness > 70%, contamination > 10%
binning parameters
MaxBin2 (v2.2.6), MetaBAT2 (v2.12.1), CONCOCT (v1.0.0)
binning software
polar environment [ENVO:01001703]
broad-scale environmental context
2019-09-10
collection date
99.16
%
completeness score
CheckM (v1.2.2)
completeness software
1.21
%
contamination score
Metagenome-assembled genome from uncultured Candidatus Methylomirabilis sp.
description
marine sediment [ENVO:03000033]
environmental medium
Arctic Ocean
geographic location (country and/or sea)
73.6961
DD
geographic location (latitude)
167.6757
DD
geographic location (longitude)
marine sediment
isolation_source
seafloor [ENVO:00000482]
local environmental context
marine sediment metagenome
metagenomic source
uncultured Candidatus Methylomirabilis sp.
organism
Marine sediment microbiomes in East Siberian Sea
project name
ERS20273661
sample derived from
uncultured Candidatus Methylomirabilis sp.
scientific_name
multi marker approach
taxonomic identity marker
10C-St8-MC-01_bin.21.strict
title