2024-07-04
ENA first public
ERC000047
ENA-CHECKLIST
KOPRI
INSDC center name
public
INSDC status
ERS20443769
SRA accession
07C-BC-St04_bin.21.strict
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
MEGAHIT (v1.2.9)
assembly software
completeness > 70%, contamination > 10%
binning parameters
MaxBin2 (v2.2.6), MetaBAT2 (v2.12.1), CONCOCT (v1.0.0)
binning software
polar environment [ENVO:01001703]
broad-scale environmental context
2016-09-03
collection date
73.58
%
completeness score
CheckM (v1.2.2)
completeness software
2.27
%
contamination score
Metagenome-assembled genome from uncultured Thermodesulfobacteriota bacterium
description
marine sediment [ENVO:03000033]
environmental medium
Arctic Ocean
geographic location (country and/or sea)
75.4231
DD
geographic location (latitude)
171.4932
DD
geographic location (longitude)
marine sediment
isolation_source
seafloor [ENVO:00000482]
local environmental context
marine sediment metagenome
metagenomic source
uncultured Thermodesulfobacteriota bacterium
organism
Marine sediment microbiomes in East Siberian Sea
project name
ERS20273658
sample derived from
uncultured Thermodesulfobacteriota bacterium
scientific_name
multi marker approach
taxonomic identity marker
07C-BC-St04_bin.21.strict
title