2024-07-04
ENA first public
ERC000047
ENA-CHECKLIST
KOPRI
INSDC center name
public
INSDC status
ERS20443890
SRA accession
10C-St8-MC-01_bin.18.orig
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
MEGAHIT (v1.2.9)
assembly software
completeness > 70%, contamination > 10%
binning parameters
MaxBin2 (v2.2.6), MetaBAT2 (v2.12.1), CONCOCT (v1.0.0)
binning software
polar environment [ENVO:01001703]
broad-scale environmental context
2019-09-10
collection date
74.63
%
completeness score
CheckM (v1.2.2)
completeness software
3.42
%
contamination score
Metagenome-assembled genome from Candidatus Krumholzibacteriia bacterium
description
marine sediment [ENVO:03000033]
environmental medium
Arctic Ocean
geographic location (country and/or sea)
73.6961
DD
geographic location (latitude)
167.6757
DD
geographic location (longitude)
marine sediment
isolation_source
seafloor [ENVO:00000482]
local environmental context
marine sediment metagenome
metagenomic source
Candidatus Krumholzibacteriia bacterium
organism
Marine sediment microbiomes in East Siberian Sea
project name
ERS20273661
sample derived from
Candidatus Krumholzibacteriia bacterium
scientific_name
multi marker approach
taxonomic identity marker
10C-St8-MC-01_bin.18.orig
title