DNA
DNA or RNA extracted
2024-07-04
ENA first public
ERC000011
ENA-CHECKLIST
Macherey-Nagel Nucleospin Plant II midi DNA extraction kit
Extraction method
20/08/20
Harvest date
Genoscope CEA
INSDC center name
public
INSDC status
ERS20526469
SRA accession
virtual_sample_ERS17727554_ERS17727555
Submitter Id
This strain was originally thought to be Discosporangium mesarthrocarpum strain KU-2346 (Disco Hydra 04-07, Disco KU-1325) isolated by Dieter Mueller from a fishery net on Hydra island, Greece on he 28/10/2004 but Liliana Munoz showed that a portion of rbcL from the strain was 99% identical with that of Choristocarpus tenellus (KU-1152) and Delphine Scornet showed that the COX1 sequence of this strain is identical to that of KU-1152. The strain is therefore Choristocarpus and not Discosporangium as previously thought and probably identical to KU-1152.
additional details
Dieter Muller
collected_by
1980-09-01
collection date
RCC7273
culture_collection
nd
generation
France
geographic location (country and/or sea)
43.6833
DD
geographic location (latitude)
7.3
DD
geographic location (longitude)
Akira Peters
identification by
Morphology, genome sequenced
identification method
Choristocarpus tenellus
organism
Choristocarpus tenellus
organism
DNA extracted from Choristocarpus tenellus strain KU-1152 for genome sequencing.
sample description
coastal
sampling ecosystem
French coast of Mediterranean Sea
sampling sea
Villefrance-sur-mer, France
sampling site
marine
sampling water type
Choristocarpus tenellus
scientific_name
Choristocarpus tenellus
scientific_name
BSI_AV
sequencing centre sample code
nd
sex
KU-1152
strain
whole thallus
tissue_type
This sample is a virtual sample of assembled raw reads from multiple physical samples of genome and is composed of physical samples ERS17727554, ERS17727555.
title