PROKKA (version 1.14.6)
16S recovery software
No
16s recovered
2024-07-16
ENA first public
ERC000050
ENA-CHECKLIST
Nova Southeastern University
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS20584269
SRA accession
5723f2f9-5962-4887-b9a2-6297da5eb207
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
MAGScoT (version 1.0.0); MetaBat (version 2.15);MaxBin (version 2.2.7)
binning software
aquatic biome
broad-scale environmental context
NIKOLOAS SCHIZAS| JAAZIEL GARCIA HERNANDEZ| ALEJANDRO GONZALEZ| MARIA DEL PILAR| DANIEL TOLEDO
collected_by
UNIVERSITY OF PUERTO RICO MAYAGUEZ
collecting institution
2021-05-10
collection date
79.57
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
1.09
%
contamination score
1.0
m
depth
adult hydrozoan tissue
environmental medium
Puerto Rico
geographic location (country and/or sea)
17.96
DD
geographic location (latitude)
-67.05
DD
geographic location (longitude)
Cayo Enrique
geographic location (region and locality)
coral reef
habitat
adult
host life stage
Millepora complanata
host scientific name
not collected
host sex
544496
host taxid
NIKOLOAS SCHIZAS| JAAZIEL GARCIA HERNANDEZ| ALEJANDRO GONZALEZ
identified_by
UNIVERSITY OF PUERTO RICO MAYAGUEZ
identifier_affiliation
metagenome-assembled genome
investigation type
Hydrozoan: Millepora complanata
isolation_source
marine biome
local environmental context
hydrozoan metagenome
metagenomic source
26
number of standard tRNAs extracted
Kiloniellaceae bacterium
organism
WHOLE ORGANISM
organism part
ASG
project name
SAMEA115837713
sample derived from
Kiloniellaceae bacterium
scientific_name
Pacbio Sequel II
sequencing method
NSU0055101
specimen_id
Sanger Institute Genome PR21
specimen_voucher
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic novelty determined using RED
taxonomic identity marker
5723f2f9-5962-4887-b9a2-6297da5eb207-asg-MAGScoT_cleanbin_000004
title
jhMilComp1.Kiloniellaceae_1
tolid