Ec191 A9 m
Alternative strain name
Air-bubbled 10 L carboy cultures in Provasoli-enriched seawater with double strength Provasoli micronutrients. Grown under 16:8h white light and at 13C. No antibiotics.
Culture conditions
DNA
DNA or RNA extracted
2.09
DNA or RNA quality (ratio 260/280)
DNA_PHAEO203-1
DNA or RNA sample code
ERC000011
ENA-CHECKLIST
28/03/19
Extraction date
OmniPrep
Extraction method
13/03/17
Harvest date
Genoscope CEA
INSDC center name
SRS1802220
INSDC secondary accession
ERS20526449
SRA accession
virtual_sample_SAMN06019601_ERS17727609
Submitter Id
Ec847m and Ec846f are brother and sister, inbred for 2 generations. Original designations were B4f and A9m indicating that strains Ec847m and Ec846f come from two different unilocs on the hterozygous sporophyte Ec191. Ec191 was the product of a cross between Ec188f x Ec189m, which were derived from the same field sporophyte collected at Le Caro, Britanny in 2005. Not known whether Ec188 and Ec189 were derived from the same or different unilocs. Sampled in 2015.
additional details
Susana Coelho
collected_by
missing: data agreement established pre-2023
collection date
RCC7090
culture_collection
immature partheno-sporophyte
dev_stage
partheno-sporophyte
generation
missing
geo_loc_name
France
geographic location (country and/or sea)
48.3333
DD
geographic location (latitude)
-4.43333
DD
geographic location (longitude)
Akira F. Peters
identification by
Morphology, genome sequenced
identification method
Ectocarpus fasciculatus
organism
Ectocarpus fasciculatus
organism
haploid
ploidy
2.2
ratio 260/230
DNA_PHAEO203-1
sample alias
DNA extracted from Ectocarpus fasciculatus strain Ec847m for genome sequencing.
sample description
coastal
sampling ecosystem
Atlantic Ocean
sampling sea
Le Caro, Rade de Brest, France
sampling site
marine
sampling water type
Ectocarpus fasciculatus
scientific_name
Ectocarpus fasciculatus
scientific_name
BSI_CS
sequencing centre sample code
male
sex
genetic cross, genome sequencing
sex determination method
Whole organism
tissue
whole thallus
tissue_type
This sample is a virtual sample of assembled raw reads from multiple physical samples of genome and is composed of physical samples SAMN06019601, ERS17727609.
title