Yes
16S recovered
PROKKA (version 1.14.5)
16S recovery software
ERC000050
ENA-CHECKLIST
2024-02-16T18:16:58Z
ENA-FIRST-PUBLIC
2024-02-16T18:16:58Z
ENA-LAST-UPDATE
SAMEA115299660
External Id
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
2024-02-16T18:16:58Z
INSDC first public
2024-02-16T18:16:58Z
INSDC last update
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS18296840
SRA accession
362c7feb-0420-4530-96b8-1d5aee20c67b
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG
assembly software
coverage; graph
binning parameters
MetaBat (version 2.15-15-gd6ea400); DASTOOL (version 1.1.5)
binning software
aquatic biome
broad-scale environmental context
NICOLE WEBSTER
collected_by
AIMS
collecting institution
2020-09-23
collection date
93.7
%
completeness score
checkM (version 1.2.1); checkM_DB (release 2015-01-16)
completeness software
5.04
%
contamination score
12.0
m
depth
adult sponge tissue
environmental medium
Australia
geographic location (country and/or sea)
18.91
DD
geographic location (latitude)
147.70
DD
geographic location (longitude)
Queensland | Great Barrier Reef | Davies Reef
geographic location (region and locality)
Reef
habitat
adult
host life stage
Cliona orientalis
host scientific name
hermaphrodite
host sex
281731
host taxid
NICOLE WEBSTER
identified_by
AIMS
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Cliona orientalis
isolation_source
marine benthic biome
local environmental context
sponge metagenome
metagenomic source
48
number of standard tRNAs extracted
Thermodesulfobacteriota bacterium
organism
WHOLE ORGANISM
organism part
ASG
project name
SAMEA115299659
sample derived from
Thermodesulfobacteriota bacterium
scientific_name
Pacbio Sequel II
sequencing method
GHC0000115
specimen_id
NOT PROVIDED
specimen_voucher
PROKKA (version 1.14.5)
tRNA extraction software
GTDB-TK (version 2.3.2); GTDB (release 214)
taxonomic classification
taxonomic classification defined by topology and ANI
taxonomic identity marker
362c7feb-0420-4530-96b8-1d5aee20c67b-asg-bin.83
title
odCliOrie1.Thermodesulfobacteriota_1
tolid