ERC000047
ENA-CHECKLIST
2024-05-24T00:31:12Z
ENA-FIRST-PUBLIC
2024-05-24T00:31:12Z
ENA-LAST-UPDATE
SAMEA110025491
External Id
Biology Centre CAS
INSDC center name
2024-05-24T00:31:12Z
INSDC first public
2024-05-24T00:31:12Z
INSDC last update
public
INSDC status
ERS12066543
SRA accession
JJ-ZL8A5-447-013-mx-bin845
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
MEGAHIT
assembly software
coverage and kmer
binning parameters
MetaBAT2
binning software
2005-08-01
collection date
64.3
%
completeness score
checkm
completeness software
0.32
%
contamination score
JJ-ZL8A5-447-013-mx-bin845 - Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae
description
freshwater lake
environment (biome)
lake
environment (feature)
fresh water
environment (material)
Czech Republic
geographic location (country and/or sea)
50.08709255
DD
geographic location (latitude)
13.1275044
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
Freshwater lake
isolation_source
freshwater metagenome
metagenomic source
Maricaulis salignorans
organism
PRJEB49198
project name
ERS11624239
sample derived from
Maricaulis salignorans
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
ERS11624239
title