ERC000047
ENA-CHECKLIST
2024-05-24T00:31:38Z
ENA-FIRST-PUBLIC
2024-05-24T00:31:38Z
ENA-LAST-UPDATE
SAMEA110021461
External Id
Biology Centre CAS
INSDC center name
2024-05-24T00:31:38Z
INSDC first public
2024-05-24T00:31:38Z
INSDC last update
public
INSDC status
ERS12066421
SRA accession
JJ-SEL19C6-181-10-m2-bin167
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
MEGAHIT
assembly software
coverage and kmer
binning parameters
MetaBAT2
binning software
2019-09-01
collection date
80.75
%
completeness score
checkm
completeness software
2.18
%
contamination score
JJ-SEL19C6-181-10-m2-bin167 - Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia
description
freshwater lake
environment (biome)
lake
environment (feature)
fresh water
environment (material)
Germany
geographic location (country and/or sea)
51.50139086
DD
geographic location (latitude)
14.04850726
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
Freshwater lake
isolation_source
freshwater metagenome
metagenomic source
Emticicia agri
organism
PRJEB49198
project name
ERS11624220
sample derived from
Emticicia agri
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
ERS11624220
title