Yes
16S recovered
PROKKA (version 1.14.5)
16S recovery software
ERC000047
ENA-CHECKLIST
2024-02-16T18:16:58Z
ENA-FIRST-PUBLIC
2024-02-16T18:16:58Z
ENA-LAST-UPDATE
SAMEA115299661
External Id
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
2024-02-16T18:16:58Z
INSDC first public
2024-02-16T18:16:58Z
INSDC last update
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS18296841
SRA accession
c48d0120-82ed-4409-9f97-f03193474b63
Submitter Id
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly quality
metaMDBG
assembly software
coverage; graph
binning parameters
MetaBat (version 2.15-15-gd6ea400); DASTOOL (version 1.1.5)
binning software
aquatic biome
broad-scale environmental context
NICOLE WEBSTER
collected_by
AIMS
collecting institution
2020-09-23
collection date
92.44
%
completeness score
checkM (version 1.2.1); checkM_DB (release 2015-01-16)
completeness software
0.45
%
contamination score
12.0
m
depth
adult sponge tissue
environmental medium
Australia
geographic location (country and/or sea)
18.91
DD
geographic location (latitude)
147.70
DD
geographic location (longitude)
Queensland | Great Barrier Reef | Davies Reef
geographic location (region and locality)
Reef
habitat
adult
host life stage
Cliona orientalis
host scientific name
hermaphrodite
host sex
281731
host taxid
NICOLE WEBSTER
identified_by
AIMS
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Cliona orientalis
isolation_source
marine benthic biome
local environmental context
sponge metagenome
metagenomic source
44
number of standard tRNAs extracted
Parvibaculaceae bacterium
organism
WHOLE ORGANISM
organism part
ASG
project name
SAMEA115299659
sample derived from
Parvibaculaceae bacterium
scientific_name
Pacbio Sequel II
sequencing method
GHC0000115
specimen_id
NOT PROVIDED
specimen_voucher
PROKKA (version 1.14.5)
tRNA extraction software
GTDB-TK (version 2.3.2); GTDB (release 214)
taxonomic classification
taxonomic novelty determined using RED
taxonomic identity marker
c48d0120-82ed-4409-9f97-f03193474b63-asg-bin.90
title
odCliOrie1.Parvibaculaceae_1
tolid