ERC000047
ENA-CHECKLIST
2024-05-24T00:31:14Z
ENA-FIRST-PUBLIC
2024-05-24T00:31:14Z
ENA-LAST-UPDATE
SAMEA110042131
External Id
Biology Centre CAS
INSDC center name
2024-05-24T00:31:14Z
INSDC first public
2024-05-24T00:31:14Z
INSDC last update
public
INSDC status
ERS12066561
SRA accession
JJ-ZLK5-86-1-m1-bin469
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
MEGAHIT
assembly software
coverage and kmer
binning parameters
MetaBAT2
binning software
2019-03-12
collection date
99.18
%
completeness score
checkm
completeness software
0.54
%
contamination score
JJ-ZLK5-86-1-m1-bin469 - Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Cyanobium
description
freshwater lake
environment (biome)
lake
environment (feature)
fresh water
environment (material)
Czech Republic
geographic location (country and/or sea)
50.08709255
DD
geographic location (latitude)
13.1275044
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
Freshwater lake
isolation_source
freshwater metagenome
metagenomic source
Cyanobium sp. NIES-981
organism
PRJEB49198
project name
ERS11624241
sample derived from
Cyanobium sp. NIES-981
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
ERS11624241
title