ERC000047
ENA-CHECKLIST
2024-05-24T00:31:22Z
ENA-FIRST-PUBLIC
2024-05-24T00:31:22Z
ENA-LAST-UPDATE
SAMEA110028724
External Id
Biology Centre CAS
INSDC center name
2024-05-24T00:31:22Z
INSDC first public
2024-05-24T00:31:22Z
INSDC last update
public
INSDC status
ERS12066576
SRA accession
VK-K11-10-1-mx-bin858
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
MEGAHIT
assembly software
coverage and kmer
binning parameters
MetaBAT2
binning software
2018-07-17
collection date
99.77
%
completeness score
checkm
completeness software
0
%
contamination score
VK-K11-10-1-mx-bin858 - Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas
description
freshwater lake
environment (biome)
lake
environment (feature)
fresh water
environment (material)
Czech Republic
geographic location (country and/or sea)
50.06523942
DD
geographic location (latitude)
13.93270926
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
Freshwater lake
isolation_source
freshwater metagenome
metagenomic source
Polaromonas sp. YR568
organism
PRJEB49198
project name
ERS11624246
sample derived from
Polaromonas sp. YR568
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
ERS11624246
title