ERC000047
ENA-CHECKLIST
2024-07-23T12:49:33Z
ENA-FIRST-PUBLIC
2024-07-23T12:49:33Z
ENA-LAST-UPDATE
SAMEA115861810
External Id
BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO
INSDC center name
2024-07-23T12:49:33Z
INSDC first public
2024-07-23T12:49:33Z
INSDC last update
public
INSDC status
ERS20608409
SRA accession
GE-03apr19-130
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
Megahit
assembly software
coverage and kmer
binning parameters
Metabat2
binning software
freshwater biome
broad-scale environmental context
2019-04-03
collection date
99.01
%
completeness score
CheckM
completeness software
1.98
%
contamination score
Chitinophagales assembled from Greifensee
description
natural lake
environmental medium
Switzerland
geographic location (country and/or sea)
47.366667
DD
geographic location (latitude)
8.7
DD
geographic location (longitude)
freshwater lake
isolation_source
freshwater lake biome
local environmental context
freshwater metagenome
metagenomic source
Chitinophagales bacterium
organism
PRJEB35640
project name
ERS4065066
sample derived from
Chitinophagales bacterium
scientific_name
multi-marker
taxonomic identity marker
GE-03apr19-130: freshwater MAG from Greifensee
title