ERC000047
ENA-CHECKLIST
2024-05-24T00:31:31Z
ENA-FIRST-PUBLIC
2024-05-24T00:31:31Z
ENA-LAST-UPDATE
SAMEA110048051
External Id
Biology Centre CAS
INSDC center name
2024-05-24T00:31:31Z
INSDC first public
2024-05-24T00:31:31Z
INSDC last update
public
INSDC status
ERS12066267
SRA accession
JJ-NAD34-325-6-m1-bin377
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
MEGAHIT
assembly software
coverage and kmer
binning parameters
MetaBAT2
binning software
2019-07-01
collection date
76.06
%
completeness score
checkm
completeness software
1.24
%
contamination score
JJ-NAD34-325-6-m1-bin377 - Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium
description
freshwater lake
environment (biome)
lake
environment (feature)
fresh water
environment (material)
Czech Republic
geographic location (country and/or sea)
49.11531046
DD
geographic location (latitude)
14.74589948
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
Freshwater lake
isolation_source
freshwater metagenome
metagenomic source
Flavobacterium psychrophilum
organism
PRJEB49198
project name
ERS11624187
sample derived from
Flavobacterium psychrophilum
scientific_name
Illumina NovaSeq 6000
sequencing method
multi-marker approach
taxonomic identity marker
ERS11624187
title