ERC000047
ENA-CHECKLIST
2024-07-23T12:49:34Z
ENA-FIRST-PUBLIC
2024-07-23T12:49:34Z
ENA-LAST-UPDATE
SAMEA115862063
External Id
BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO
INSDC center name
2024-07-23T12:49:34Z
INSDC first public
2024-07-23T12:49:34Z
INSDC last update
public
INSDC status
ERS20608662
SRA accession
ZE-03apr19-LR-20
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
Flye
assembly software
coverage and kmer
binning parameters
Metabat2
binning software
freshwater biome
broad-scale environmental context
2019-04-03
collection date
78.83
%
completeness score
CheckM
completeness software
1.05
%
contamination score
Candidatus Nanopelagicaceae assembled from Lake Zurich
description
natural lake
environmental medium
Switzerland
geographic location (country and/or sea)
47.3
DD
geographic location (latitude)
8.566667
DD
geographic location (longitude)
freshwater lake
isolation_source
freshwater lake biome
local environmental context
freshwater metagenome
metagenomic source
Candidatus Nanopelagicaceae bacterium
organism
PRJEB35640
project name
ERS4065062
sample derived from
Candidatus Nanopelagicaceae bacterium
scientific_name
multi-marker
taxonomic identity marker
ZE-03apr19-LR-20: freshwater MAG from Lake Zurich
title