ERC000024
ENA-CHECKLIST
2024-06-22T01:06:25Z
ENA-FIRST-PUBLIC
2024-06-22T01:06:25Z
ENA-LAST-UPDATE
SAMEA110176228
External Id
Microbial ecology
INSDC center name
2024-06-22T01:06:25Z
INSDC first public
2024-06-22T01:06:25Z
INSDC last update
public
INSDC status
ERS12275040
SRA accession
2NDNEGCTRLF045
Submitter Id
2018-04-24
collection date
Negative control sample, a 0.45 micrometer filter used for DNA extraction
description
anthropogenic environment (ENVO:01000313)
environment (biome)
laboratory environment (ENVO:01001405)
environment (feature)
laboratory supplies
environment (material)
France
geographic location (country and/or sea)
-0.75
m
geographic location (depth)
318
m
geographic location (elevation)
45.792386
DD
geographic location (latitude)
4.706930
DD
geographic location (longitude)
Auvergne-Rh�ne-Alpes administrative region, Rh�ne department, Gr�zieu-la-Varenne town
geographic location (region and locality)
mimarks-survey
investigation type
blank sample
organism
ILMN-PTCF2 (GTGCCGYTRTGYGGCAAGA) and ILMN-PTCF2m (GTGCCCYTRTGYGGCAAGT); ILMN-PTCR2 (ATCAKYGCGGCGCGGTCRTA) and ILMNPTCR2m (ATGAGBGCTGCCCTGTCRTA)
pcr primers
Ecological assessment of combined-sewer overflow practices (PRJEB53724) - Domic 2115
project name
not provided
sampling campaign
not provided
sampling transect ID
blank sample
scientific_name
Sequencing by synthesis (Illumina MiSeq Illumina V3)
sequencing method
Thiopurine S-methyltransferase (tpm)
target gene
200-235 bp, including the VPLCGK and YDRAAM conserved domains
target subfragment
0.45 micrometer sterile filter
title
water
water environmental package