Gastrointestinal tract
http://purl.obolibrary.org/obo/HP_0011024
Body Sample Site
SAMN00001910
External Id
DOE-GEBA 2007
Funding Program
Gc01276
GOLD Stamp ID
Prodigal, GenePRIMP
Gene Calling Method
gram-
Gram Staining
88867
Greengenes ID
Swine
http://purl.obolibrary.org/obo/NCBITaxon_36420
Host Name
Joint Genome Institute, U.S. Department of Energy
INSDC center name
2009-02-19T00:00:00Z
INSDC first public
2023-12-24T02:00:07.491Z
INSDC last update
SRS002077
INSDC secondary accession
live
INSDC status
Generic
NCBI submission model
Generic.1.0
NCBI submission package
SRS002077
SRA accession
Nonsporulating
Sporulation
Yes
Type Strain
free living
biotic relationship
Intestinal tract
body sample subsite
Spiral-shaped
cell shape
1992
collection date
Canada
http://www.orpha.net/ORDO/Orphanet_2930
country
Keywords: GSC:MIGS:2.1
description
Host, Intestinal microflora
environment
Healthy
http://purl.obolibrary.org/obo/PATO_0000461
host health
bacteria_archaea
investigation type
intestinal contents of healthy swine
isolation site
intestinal contents of healthy swine
isolation-source
52.939 N 73.549 W
lat lon
Motile
motility
1
num_replicons
79829 Sanger, 861386 pyrosequencing
number of reads
Brachyspira murdochii DSM 12563
http://purl.obolibrary.org/obo/NCBITaxon_526224
organism
Brachyspira murdochii 56-150, DSM 12563
project name
DSM 12563, ATCC 51284, CIP 105832
ref_biomaterial
anaerobe
rel_to_oxygen
19.7x Sanger, 48.9x pyrosequence
sequencing depth
DSM 12563
strain
39C
temperature optimum
Mesophile
temperature range
Brachyspira murdochii DSM 12563, complete genome.
title
chemoorganotroph
trophic_level
type strain of Serpulina murdochii
type-material