SAMN00627102
External Id
Washington University, Genome Sequencing Center
INSDC center name
2012-04-16T00:00:00Z
INSDC first public
2023-12-11T21:08:30.402Z
INSDC last update
SRS211953
INSDC secondary accession
live
INSDC status
MIGS.ba
NCBI submission model
MIGS.ba.6.0
NCBI submission package
SRS211953
SRA accession
Newbler, PCAP
assembly
terrestrial biome [ENVO:00000446]
biome
not determined
collection date
454 sequencing of Ruminococcus gnavus ATCC 29149
description
3502000
estimated size
human-associated habitat [ENVO:00009003]
feature
Level 3: Improved-High-Quality Draft8.7x;105
finishing strategy (depth of coverage)
not determined
geo loc name
9606
host taxid
not determined
isol_growth_condt
not determined
lat lon
biological product [ENVO:02000043]
material
not determined
misc_param: HMP body site
gastrointestinal_tract
misc_param: HMP supersite
not determined
nucleic acid extraction
not determined
num_replicons
Mediterraneibacter gnavus ATCC 29149
http://purl.obolibrary.org/obo/NCBITaxon_411470
organism
Ruminococcus gnavus ATCC 29149
project name
Reference Genome
project_type
not determined
ref_biomaterial
454-GS20, Sanger
sequencing method
http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sop
ATCC 29149
source_mat_id
Homo sapiens
http://purl.obolibrary.org/obo/NCBITaxon_9606
specific host
ATCC 29149
strain
MIGS Cultured Bacterial/Archaeal sample from Ruminococcus gnavus ATCC 29149
title
type strain of Ruminococcus gnavus
type-material