PROKKA (version 1.14.6)
16S recovery software
Yes
16s recovered
2024-08-06
ENA first public
ERC000050
ENA-CHECKLIST
Geomar Helmholtz Centre
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS20849132
SRA accession
673af3fe-685e-458c-9fd6-101f040c8f34
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
coverage; graph
binning parameters
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
binning software
aquatic biome
broad-scale environmental context
KATHRIN BUSCH
collected_by
GEOMAR
collecting institution
2018-08-09
collection date
98.29
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
9.4
%
contamination score
333
m
depth
adult sponge tissue
environmental medium
Norway
geographic location (country and/or sea)
71.59
DD
geographic location (latitude)
21.37
DD
geographic location (longitude)
Troms√∏flaket_C
geographic location (region and locality)
continental shelf:plain
habitat
adult
host life stage
Stryphnus fortis
host scientific name
not applicable
host sex
1006811
host taxid
HANS TORE RAPP
identified_by
UiB, Norway
identifier_affiliation
metagenome-assembled genome
investigation type
Sponge: Stryphnus fortis
isolation_source
marine benthic biome
local environmental context
sponge metagenome
metagenomic source
51
number of standard tRNAs extracted
Bryobacterales bacterium
organism
WHOLE ORGANISM
organism part
ASG
project name
unknown
relationship
SAMEA115905275
sample derived from
Bryobacterales bacterium
scientific_name
Pacbio Sequel II
sequencing method
GHC0000039
specimen_id
NOT PROVIDED
specimen_voucher
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic novelty determined using RED
taxonomic identity marker
673af3fe-685e-458c-9fd6-101f040c8f34-asg-MAGScoT_cleanbin_000069
title
odStrFort4.Bryobacterales_10
tolid