MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.soil
BioSampleModel
Y
Blank
NA
ConnectivityStudy
2023-06-08T01:20:32Z
ENA-FIRST-PUBLIC
2023-06-08T01:20:32Z
ENA-LAST-UPDATE
SAMN35625611
External Id
N
ExtrBlank
ACGACGTG
Fwd_Primer_Barcode
ZZ
Group2
16
GroupOrAgit
pda|jaimiewest@orcid
INSDC center name
2023-06-08T01:20:32Z
INSDC first public
2023-06-08T01:20:32Z
INSDC last update
public
INSDC status
Y
IncubBlank
N
Initial
N
Meta
NA
MetaOrder
NA
MixingStudy
Unsaturated
Moisture
Oxic
O2
4
Rep
GTCGTAGT
Rev_Primer_Barcode
SRS17928478
SRA accession
29_16X_blank
Submitter Id
16X
TimesMixed
16X_blank
Trt
N
VortexControl
N
WaterBlank
NA
annual_precpt
NA
annual_temp
NCBI
broker name
NA
collection_date
NA
collection_method
hardwoods (e.g. oak,hickory,elm,aspen)
cur_land_use
northern mesic forest, early-to-mid seral
cur_vegetation
NA
depth
moderately well
drainage_class
NA
elev
NA
env_broad_scale
NA
env_local_scale
NA
env_material
16 week lab incubation
extreme_event
Luvisols
fao_class
NA
geo_loc_name
NA
lat_lon
NA
local_class
Qiagen DNeasy PowerLyzer PowerSoil DNA extraction kit
nucl_acid_ext
metagenome
organism
initial denaturation:98_2; denaturation:98_0.167; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 30
pcr_cond
NA
ph
NA
ph_meth
NA
pool_dna_extracts
Metal core, 1.8 cm dia
samp_collect_device
4 C until sieving to 2mm and start of incubation at RT
samp_mat_process
50 mg
samp_size
50 mg
samp_vol_we_dna_ext
metagenome
scientific_name
Illumina MiSeq 2x250 PE
seq_meth
2mm
sieving
A horizon
soil_horizon
silt loam
soil_text_measure
Freeon silt loam
soil_type
USDA soil classification
soil_type_meth
16S rRNA
target_gene
V4
target_subfragment
29_16X_blank
title