SARS-CoV-2: clinical or host-associated
BioSampleModel
2023-06-14T23:26:19Z
ENA-FIRST-PUBLIC
2023-06-14T23:26:19Z
ENA-LAST-UPDATE
SAMN35729352
External Id
CDC-OAMD
INSDC center name
2023-06-14T23:26:19Z
INSDC first public
2023-06-14T23:26:19Z
INSDC last update
public
INSDC status
SARS-CoV-2/Human/USA/CA-CDC-LC1043959/2023
Isolate
SRS17969681
SRA accession
SARS-CoV-2/Human/USA/CA-CDC-LC1043959/2023
Submitter Id
NCBI
broker name
Laboratory Corporation of America
collected_by
2023-06-01
collection_date
Nasal Swabs
collection_device
Nasal Swabs
collection_method
N1 gene
diagnostic_gene_name_1
N2 gene
diagnostic_gene_name_2
RP gene
diagnostic_gene_name_3
24.669
diagnostic_pcr_Ct_value_1
22.11
diagnostic_pcr_Ct_value_2
28.675
diagnostic_pcr_Ct_value_3
Labcorp LDT
diagnostic_pcr_protocol_1
Labcorp LDT
diagnostic_pcr_protocol_2
Labcorp LDT
diagnostic_pcr_protocol_3
USA: California
geo_loc_name
Homo sapiens
host
48
host_age
COVID-19
host_disease
Unknown
host_race
female
host_sex
Nasal Swabs
isolation_source
XBB.1.5
lineage/clade name
Severe acute respiratory syndrome coronavirus 2
organism
baseline surveillance (random sampling)
purpose_of_sequencing
Severe acute respiratory syndrome coronavirus 2
scientific_name
CDC Sars CoV2 Sequencing Baseline Constellation
title