SARS-CoV-2: wastewater surveillance
BioSampleModel
2023-07-21T00:12:55Z
ENA-FIRST-PUBLIC
2023-07-21T00:12:55Z
ENA-LAST-UPDATE
SAMN36652382
External Id
pda|mdoucette_madph
INSDC center name
2023-07-21T00:12:55Z
INSDC first public
2023-07-21T00:12:55Z
INSDC last update
public
INSDC status
SRS18373879
SRA accession
22WW54
Submitter Id
NCBI
broker name
Massachusetts State Department of Public Health
collected_by
2022-04-30/2022-05-02
collection_date
MA01
collection_site_id
9:30-9:30
collection_time
innovaprep ultrafiltration
concentration_method
Murine Hepatitis Virus
extraction_control
zymo quick-rna viral kit
extraction_method
USA: Massachusetts
geo_loc_name
wastewater
isolation_source
wastewater metagenome
organism
GenomeTrakr; LFFM ww project
project_name
public health surveillance community-level
purpose_of_ww_sampling
wastewater metagenome
scientific_name
Massachusetts State Department of Public Health
sequenced_by
47696166
ww_flow
94000
ww_population
wastewater treatment plant records
ww_population_source
48
ww_sample_duration
raw wastewater
ww_sample_matrix
wastewater treatment plant
ww_sample_site
composite
ww_sample_type
SARS-CoV-2
ww_surv_target_1
138403.902
ww_surv_target_1_conc
copies/L
ww_surv_target_1_conc_unit
N gene (N2)
ww_surv_target_1_gene
yes
ww_surv_target_1_known_present
ddPCR detection of SARS-CoV-2 using the BioRad PREvalence Kit on the BioRad QXOne
ww_surv_target_1_protocol
4
ww_temperature