PROKKA (version 1.14.6)
16S recovery software
Yes
16s recovered
2024-08-20
ENA first public
ERC000050
ENA-CHECKLIST
University of Derby
GAL
NOT PROVIDED
GAL_sample_id
Tree of Life Programme
INSDC center name
public
INSDC status
Minimap2 (version 2.24-r1122)
MAG coverage software
ERS20899602
SRA accession
4d75f9d9-2951-41d2-9bdd-258bde0f0a38
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaMDBG (version 0.3)
assembly software
UNIVERSITY OF DERBY
barcoding center
coverage; graph
binning parameters
MetaBat (version 2.15); DASTOOL (version 1.1.5)
binning software
aquatic biome
broad-scale environmental context
Andrew Baird
collected_by
James Cook University
collecting institution
2021-07-09
collection date
76.31
%
completeness score
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
completeness software
1.23
%
contamination score
0.5
m
depth
adult coral tissue
environmental medium
Australia
geographic location (country and/or sea)
-29.66
DD
geographic location (latitude)
153.33
DD
geographic location (longitude)
Solitary Islands
geographic location (region and locality)
intertidal rock pool
habitat
adult
host life stage
Cyphastrea salae
host scientific name
not applicable
host sex
1967629
host taxid
Andrew Baird
identified_by
James Cook University
identifier_affiliation
metagenome-assembled genome
investigation type
Coral: Cyphastrea salae
isolation_source
marine benthic biome
local environmental context
coral metagenome
metagenomic source
44
number of standard tRNAs extracted
Acinetobacter sp.
organism
WHOLE ORGANISM
organism part
2021-07-09
original collection date
AustraliaÂ | Solitary Islands
original collection location
ASG
project name
SAMEA115940655
sample derived from
Acinetobacter sp.
scientific_name
Pacbio Sequel II
sequencing method
UDUK0000297
specimen_id
NA
specimen_voucher
PROKKA (version 1.14.6)
tRNA extraction software
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic classification
taxonomic classification defined by topology and ANI
taxonomic identity marker
4d75f9d9-2951-41d2-9bdd-258bde0f0a38-asg-bin.34
title
jaCypSala7.Acinetobacter_sp_1
tolid